Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1743 ATGGAGTATCCATCCTTGTCCAATTTAGCTAAGGAAGTCTTGAGGCAGATGAAAAGGGTAGAGGATAATGTTCAATATTTTGCAGCAGCTGAAAGATTTGGACCGTTGATTTCACGGTTACATGATGGTTCTGTTGGTGTAAAGATTGAGATGGCTTCTCTGGTGGGAAGGATGACCTTGACAAATAGCTGTAAAGAACAAATTGCAAGGCAAGGTGGCAGAGTATTTGTCGAACTTTTGTCTAATAAAGAAGGAAGGGGACCAAGTCTGCAAGCATTGTATAACTTGTCAGGATTGGATGGCAATGCAACCATCTTTATTGAATCTTCAGTCCTTCCATCTCTTATAAAGTCTTATTTGATGAGCAGGATTCATCATATGAGCTGA 387 0.4005 MEYPSLSNLAKEVLRQMKRVEDNVQYFAAAERFGPLISRLHDGSVGVKIEMASLVGRMTLTNSCKEQIARQGGRVFVELLSNKEGRGPSLQALYNLSGLDGNATIFIESSVLPSLIKSYLMSRIHHMS* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1743 128 SUPERFAMILY ARM repeat 12 117 IPR016024 -
Gso11g1743 128 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 120 - -
Gso11g1743 128 Gene3D - 23 123 IPR011989 -
Gso11g1743 128 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1743 Gso-Chr11 24567335 24568424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1743 10 118 U-box Gene Family AT1G76390 33.333 3.47e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1743 - - gsj:114374981 249.98