Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1730 ATGTCTTGTTCCGTGGCAGTTCCAACTTCCCCCGTGTTCTCTTTCTATAACAACAACAACGTTAACTCTAATTCCATTCCCTCTACGACGCCGTCTTGCTCCTCTCCACCCTCCTCTCCCTTGTTGAAGAGAAGGAGGCCGGCCAAACTCGACATTCCCGTCGCTTCTCTCGCTTTTGGTCTCTCGCCGGCGGCGGCTCCATCTCCGGCGAGGGACGCCGTCGTGGAGGTCGACGGACGCGGGTTTTCCGTGTTCTGCAAACGAGGAAGGAGGCATCATATGGAGGATCGTTTCTCCGCTGCCGTTGATCTTCACGGTCAACCAAAACAGGCTTTTTTCGGGATATTTGATGGGCATGGGGGCACAAAGGCTTCGGAATTCGCTGCACATAACTTAGAAAAAAATGTGTTGGACGAGGTGGTTAGGAGAGACGAATGTGACATTAAGGAGGCAGTGAAGCATGGTTACCTTAACACAGATTCTGAATTCTTGAAGGAGGATCTTAATGGTGGTTCTTGCTGTGTAACAGCATTGATTAGGAACGGTAACCTTGTTGTTTCCAATGCTGGTGATTGTCGTGCTGTGATTAGCAGAGGGGATATGGCTGAAGCCCTAACATCTGATCACAAGCCTTCTAGGGAAGATGAAAGGGACAGAATTGAGACTCAGGGTGGCTATGTTGATGTGTGCCGTGGTGTTTGGAGGATACAAGGGTCATTGGCTGTTTCTAGGGGAATTGGAGATAGAAACCTGAAACAATGGGTCATAGCAGAACCTGAGACCAAAGTTATCAAAATTGAGCCTCAGCATGACTTGTTGATCTTAGCTTCAGATGGATTATGGGAAAAGGTTAGCAATCAGGAAGCAGTAGATATTGCTCGTCCTTTATGTGTAGGGAACAATAGACAACAACCATTGCTGGCTTGTAAGAAACTCGTGGAATTATCTGTGTCACGAGGCTCTCTGGATGACATAAGTGTTATGATTATCAAATTGCAAAACTATATTTGA 1011 0.4708 MSCSVAVPTSPVFSFYNNNNVNSNSIPSTTPSCSSPPSSPLLKRRRPAKLDIPVASLAFGLSPAAAPSPARDAVVEVDGRGFSVFCKRGRRHHMEDRFSAAVDLHGQPKQAFFGIFDGHGGTKASEFAAHNLEKNVLDEVVRRDECDIKEAVKHGYLNTDSEFLKEDLNGGSCCVTALIRNGNLVVSNAGDCRAVISRGDMAEALTSDHKPSREDERDRIETQGGYVDVCRGVWRIQGSLAVSRGIGDRNLKQWVIAEPETKVIKIEPQHDLLILASDGLWEKVSNQEAVDIARPLCVGNNRQQPLLACKKLVELSVSRGSLDDISVMIIKLQNYI* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1730 336 SUPERFAMILY PP2C-like 82 334 IPR036457 -
Gso11g1730 336 ProSitePatterns PPM-type phosphatase domain signature. 112 120 IPR000222 GO:0043169
Gso11g1730 336 Gene3D - 75 336 IPR036457 -
Gso11g1730 336 SMART PP2C_SIG_2 92 332 IPR001932 -
Gso11g1730 336 Pfam Protein phosphatase 2C 82 324 IPR001932 -
Gso11g1730 336 SMART PP2C_4 67 330 IPR001932 -
Gso11g1730 336 PANTHER PROTEIN PHOSPHATASE 2C 3 335 IPR015655 GO:0004722|GO:0006470
Gso11g1730 336 ProSiteProfiles PPM-type phosphatase domain profile. 81 332 IPR001932 -
Gso11g1730 336 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 3 335 - -
Gso11g1730 336 CDD PP2Cc 80 332 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1730 Gso-Chr11 24245861 24248220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1730 25 336 PP2C-type Phosphatase Gene Family AT2G30020 64.890 1.28e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1730 K17506 - gmx:100813073 594.349