Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1718 ATGTCTTGTTCCGTGGCAGTTCCAACTTCCCCCGTGTTCTCTTTCTACAACAACAACGTTAACTCTAATTCCATTCCCTCTACGACGCCGTCTTGCTCCTCTCCACCCTCCTCTCCCTTGTTGAAGAGAAGGAGACCGGCCAAACTCGACATTCCCGTCGCTTCTCTCGCTTTTGGTCTCTCGCCGGCGGCGGCGCCATCTCCGGCGAGGGACGCCGTCGTGGAGGTCGACGGACGCGGGTTTTCCGTGTTCTGCAAACGAGGAAGGAGGCATCATATGGAGGATCGTTTCTCCGCTGCCGTTGATCTTCACGGTCAACCAAAACAGGCTTTTTTCGGGATATTTGATGGGCATGGGGGCACAAAGGCTTCGGAATTCGCTGCACATAACTTAGAAAAAAATGTGTTGGACGAGGTGGTTAGGAGAGACGAATGTGACATTAAGGAGGCAGTGAAGCATGGTTACCTTAACACAGATTCTGAATTCTTGAAGGAGGATCTTAATGGTGGTTCTTGCTGTGTAACAGCATTGATTAGGAACGGTAACCTTGTTGTTTCCAATGCTGGTGATTGTCGTGCTGTGATTAGCAGAGGGGATATGGCTGAAGCCCTAACATCTGATCACAAGCCTTCTAGGGAAGATGAAAGGGACAGAATTGAGACTCAGGGTGGCTATGTTGATGTGTGCCGTGGTGTTTGGAGCATACAAGGGTCATTGGCTGTTTCTAGGGGAATTGGAGATAGAAACCTGAAACAATGGGTCATAGCAGAACCTGAGACCAAAGTTATCAAAATTGAGCCTCAGCATGACTTGTTGATCTTAGCTTCAGATGGATTATGGGAAAAGGTTAGCAATCAGGAAGCAGTAGATATTGCTCGTCCTTTATGTGTAGGGAACAATAGACAACAACCATTGCTGGCTTGTAAGAAACTCGTGGAATTATCTGTGTCACGAGGCTCTCTGGATGACATAAGTGTTATGATTATCAAATTGCAAAACTATATTTGA 1008 0.4722 MSCSVAVPTSPVFSFYNNNVNSNSIPSTTPSCSSPPSSPLLKRRRPAKLDIPVASLAFGLSPAAAPSPARDAVVEVDGRGFSVFCKRGRRHHMEDRFSAAVDLHGQPKQAFFGIFDGHGGTKASEFAAHNLEKNVLDEVVRRDECDIKEAVKHGYLNTDSEFLKEDLNGGSCCVTALIRNGNLVVSNAGDCRAVISRGDMAEALTSDHKPSREDERDRIETQGGYVDVCRGVWSIQGSLAVSRGIGDRNLKQWVIAEPETKVIKIEPQHDLLILASDGLWEKVSNQEAVDIARPLCVGNNRQQPLLACKKLVELSVSRGSLDDISVMIIKLQNYI* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1718 335 Gene3D - 74 335 IPR036457 -
Gso11g1718 335 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 3 334 - -
Gso11g1718 335 CDD PP2Cc 79 331 IPR001932 -
Gso11g1718 335 SMART PP2C_4 66 329 IPR001932 -
Gso11g1718 335 ProSitePatterns PPM-type phosphatase domain signature. 111 119 IPR000222 GO:0043169
Gso11g1718 335 PANTHER PROTEIN PHOSPHATASE 2C 3 334 IPR015655 GO:0004722|GO:0006470
Gso11g1718 335 ProSiteProfiles PPM-type phosphatase domain profile. 80 331 IPR001932 -
Gso11g1718 335 SUPERFAMILY PP2C-like 81 333 IPR036457 -
Gso11g1718 335 SMART PP2C_SIG_2 91 331 IPR001932 -
Gso11g1718 335 Pfam Protein phosphatase 2C 81 323 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1718 Gso-Chr11 23805464 23807788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1718 24 335 PP2C-type Phosphatase Gene Family AT2G30020 64.577 1.02e-141 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1718 K17506 - gmx:100779913 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1718 11 23805464 23807788 Gso11g1718 11 23805464 23807788 ECH