Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1713 ATGCCAACCCAACCAGATTCACCACCCAACAACAACACGTTGACCCAAATGTTTCAGAACATCTTCTCAGACAACAGTAACATCATGCTTGCAGCCATCATTTCCCTTCTCTTAGTAATCCTCTTTGTCCTTCTTCTTCACCTCTACGCCAAGTGGTTCCTCGCTCAAGCACAGGCTCAGGCCAACGCCCGCCGCCGGAGGCGGCGCCGTCGCACGACGGTGACCGTCTCCGACGTCCTAGGCCCGGCAAGGTTCCACCACTTCCACAGCTTCACCATAGAAGACAGTTCACCCCTCTCAACAAAAGGGTTAGATTCTTCAACCATTAGAACAATTCCACTGTTCATCTATGAACACAACAACAACAACAACAAAAAGGTCGAAGAAGAAGAAGAAGAACTTGAATGTGTGATTTGTTTGAGTGCATTTAAGAATGGTGAAGTGGGAAGGTGTTTGCCAAAGTGTGGCCATGGCTTCCATGTGGAGTGCATTGACATGTGGTTGAGTTCACACTCCAATTGTCCTATTTGTAGAACCTCAATTGTAGCAAGTATTGTGGAAAATAATTCTAGTGATGATCATCATGGTGGAGATCATCATGATTTGGTTGAGATTGTGACTGAAGGTGGTTCTGCTGCTCCAAGTTCTGAGACTAGAGAGGGTGAACATGGGAATAGTAATAATGGAAATGGAGGAGCAAGAACAAGTGTTTCTGTTGTGTCAGAAAATTCTTCTTCTGAGTTCTTTGGATGCTCTTTGGAGAGAATGCTTGGCAAGGTTTTCCCAATATCAAGTAATGTTAATTAA 807 0.4473 MPTQPDSPPNNNTLTQMFQNIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAQAQANARRRRRRRRTTVTVSDVLGPARFHHFHSFTIEDSSPLSTKGLDSSTIRTIPLFIYEHNNNNNKKVEEEEEELECVICLSAFKNGEVGRCLPKCGHGFHVECIDMWLSSHSNCPICRTSIVASIVENNSSDDHHGGDHHDLVEIVTEGGSAAPSSETREGEHGNSNNGNGGARTSVSVVSENSSSEFFGCSLERMLGKVFPISSNVN* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1713 268 MobiDBLite consensus disorder prediction 211 237 - -
Gso11g1713 268 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 1 267 IPR044675 -
Gso11g1713 268 PANTHER - 1 267 - -
Gso11g1713 268 SMART ring_2 136 177 IPR001841 -
Gso11g1713 268 SUPERFAMILY RING/U-box 128 184 - -
Gso11g1713 268 CDD RING-H2_EL5_like 136 178 - -
Gso11g1713 268 ProSiteProfiles Zinc finger RING-type profile. 136 178 IPR001841 -
Gso11g1713 268 Pfam Ring finger domain 135 178 IPR001841 -
Gso11g1713 268 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 183 IPR013083 -
Gso11g1713 268 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1713 Gso-Chr11 23634422 23635496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1713 22 185 Rapid Response to Elicitors AT3G16720 38.095 1.54e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1713 - - gmx:100816238 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1713 11 23634422 23635496 Gso11g1713 11 23634422 23635496 ECH