Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1702 ATGGAGTTCAACAAGTTCAGAATCAGAAGCTATGAGGGGCAATCTGATAGGGCTCAAGTGGAAGATCTTGAGAGAAGATGCGAGGTAGGGCCATCAGAAAGCGTGTTTCTCTTCACAGACACTATGGGTGACCCCATTTGTAGGATCCGGAACAGTCCCATGTACATGATGCTGGTGGCAGAGTTGGAAAATGAATTGGTTGGTGTCATTCAAGGGTCTATAAAAGTGGTCACGGTTCATGGTCACCCTCCAAAGGATTTGGCAAAGGTGGGGTATGTCCTTGGCCTAAGGGTATCACCTCACCACCGGAGAAAAGGGATTGGCTCAAGCCTTGTGAAAACCCTAGAAGAATGGTTCACTTCAAAAGATGTGGACTATGCATACATGGCAACAGAGAAAGACAACCATGCCTCAGTGAGTCTCTTCATGGACAAGTTTGGCTACATCAAGTTCAGGACTCCAGCTATTCTTGTCAACCCCGTGAACCATCATTGCTTTCAAATATCACCCAACATTGAGATAACAAGGTTGAAGGTGGACCAAGCTGAGTACTTCTATAGAAGATTCATGGGGTCCACAGAGTTCTTCCCAAATGACATAGGGAATATACTTAGGAACAAGCTAAGTTTGGGGACATGGGTGGCATATTTCAAAGGTGATATTGCTTGGGGTGATTTTGGGTCAGATATTGGACAAGTACCAAATAGTTGGGCTATGCTTAGTGTATGGAATAGTGGGGAGATATTCAAGTTAAGGCTAGGGAAAGCACCTTTTTCTTGCTTGGTATGCACCAAGAGTTGGTGGTTGATTGATAAGATTTTCCCATGTTTGAAATTGCCAACCATACCTGATTTCTTCAACCCATTTGGGTTCTATTTCATGTATGGGGTGCACCGTGAAGGGCCATTTTCAGGGAAGCTAGTGAGGGCCTTGTGCCAATTTGTGCACAACATGGGTGCTGAGTCCAAGGATGAGAGCAATTGCAAGATCATTGTGACTGAAGTTGAAGGAAGAGATGAACTCAACCACCATATCCCACATTGGAAATTGCTCTCATGCCAGGAGGACTTGTGGTGCATAAAGTCGTTGAAAAATATTGAAGGGACAAATAACAACTTCCATGAATTAACAACCAAAACCCCACCAACAAGAGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 1182 0.4416 MEFNKFRIRSYEGQSDRAQVEDLERRCEVGPSESVFLFTDTMGDPICRIRNSPMYMMLVAELENELVGVIQGSIKVVTVHGHPPKDLAKVGYVLGLRVSPHHRRKGIGSSLVKTLEEWFTSKDVDYAYMATEKDNHASVSLFMDKFGYIKFRTPAILVNPVNHHCFQISPNIEITRLKVDQAEYFYRRFMGSTEFFPNDIGNILRNKLSLGTWVAYFKGDIAWGDFGSDIGQVPNSWAMLSVWNSGEIFKLRLGKAPFSCLVCTKSWWLIDKIFPCLKLPTIPDFFNPFGFYFMYGVHREGPFSGKLVRALCQFVHNMGAESKDESNCKIIVTEVEGRDELNHHIPHWKLLSCQEDLWCIKSLKNIEGTNNNFHELTTKTPPTRALFVDPREV* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1702 393 Pfam Acetyltransferase (GNAT) family 47 148 IPR000182 GO:0016407
Gso11g1702 393 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 393 - -
Gso11g1702 393 Gene3D - 10 154 - -
Gso11g1702 393 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 162 IPR000182 GO:0016407
Gso11g1702 393 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 151 IPR016181 -
Gso11g1702 393 CDD NAT_SF 57 128 - -
Gso11g1702 393 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1702 Gso-Chr11 23221876 23224521 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso11g1702 Acetyltransf_1 9.3e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1702 - - gmx:100802038 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1702 11 23221876 23224521 Gso11g1702 11 23221876 23224521 ECH