Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1693 ATGGAGAACCCTAAAGAAAATAACAAGGTAGAGAACCATCATACGGTGAATGCAATTTTGAGTCCTACTTTTGTCTTTTCTGCTACAAAACTAGCAGACCAATTCGGATATGCAGAAGGTAATCCTACTCCAGAACAACAAATATTGGATCCTAAATTAAGAAGAATATTTTCTAACCGATTTGCTGCCCAAAGATCAAGGGAGAAGAAGAAAAATCATTTAGCCGATTTGGAGATTCAAAAGAAAACTTTTGAGAATGAAATAGCCCAAAAACAACAACTACAAGATTTGTACGAAAATAAGAGGCAGACTCAGATAGTAGAAGAAGAAATAATGTACCAGGAAATTGATATTCTTAAGAATTATTCAATGTTCAAAGATGGTGAAATTGAGAAGGACAAAGGTGAAGTGATTAGGGAGAGGGAACTCCAAGTGATAGAGCAACAAGAGGAATTGCAAGCACAGTTGGTTAACTTGAATATTGGTCCACAGGAGTGTCCAATTATCCAACCTCAATTTATTATGCAAACTCATATCCAGTTGCAGCAAATGAAGTGGATCCACTTGAGTCATACATACCACCAGAGCCAAGGGAGATGCGGTTTCCTGCTGTGCCAAATTTGCATGATTTGA 633 0.3728 MENPKENNKVENHHTVNAILSPTFVFSATKLADQFGYAEGNPTPEQQILDPKLRRIFSNRFAAQRSREKKKNHLADLEIQKKTFENEIAQKQQLQDLYENKRQTQIVEEEIMYQEIDILKNYSMFKDGEIEKDKGEVIRERELQVIEQQEELQAQLVNLNIGPQECPIIQPQFIMQTHIQLQQMKWIHLSHTYHQSQGRCGFLLCQICMI* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1693 210 PANTHER BASIC LEUCINE ZIPPER 34 3 173 - -
Gso11g1693 210 Pfam Basic region leucine zipper 52 93 IPR004827 GO:0003700|GO:0006355
Gso11g1693 210 SMART brlzneu 47 111 IPR004827 GO:0003700|GO:0006355
Gso11g1693 210 SUPERFAMILY Leucine zipper domain 52 100 IPR046347 GO:0003700|GO:0006355
Gso11g1693 210 PANTHER ACTIVATOR OF SPOMIN LUC3 3 173 - -
Gso11g1693 210 Gene3D - 52 105 - -
Gso11g1693 210 Coils Coil 67 104 - -
Gso11g1693 210 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 54 69 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1693 Gso-Chr11 22061880 22064465 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1693 28 128 bZIP Transcription Factor Family AT2G42380 30.392 2.58e-06 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso11g1693 bZIP_2 2.2e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1693 - K25784 gsj:114373066 400.208