Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1692 ATGGAGAACAATAAAATAGGTCATTCAAAGGAAAACATGGTTGCCTCTAAACCCCCCTTGATCCCCATTTTGTCATTTCAAAGTTTGCAAAAGACTTTCTATAGGGATGCTCCTGGAACTAGTAACTCTACTCCTCAAAATGAAAATAACAGGTTAGAGAATCCTGCAGATATAAATCCAGCTCTTGTTGCTTCCGAGTCAACTCCAAAACTAATAGTGGATCAAACTCAGGCAAAAAGCCCTGATGCCGATCTTAAAAAATTACGGAGAATGGAGTCTAATCGGCTTTCATCCCGAAGATCGTGGATGAAGAAGTTGATATATTTGACCAATTTGGAAAATCAAGTAAAAAATTTAGAGGATCAATTAGCTCAACTTCGACCACAAATTGCTTCCCATGAATCCCAGAAACAGTTCTTAATGCTAGAAAAACAGACAATGCTCCAGAGAATGGAAATTCTTGAGAAAGAGATAAACTTCAGAGAGTCTGATCTTGAGATGAAAAAAGAACAAGTGAAATATCTGAGGGAATCCTATCCGATGAATCAAGCTAAGCAATTGCAAGAACAATTTCTTAATTGGAATATTGGTCTGCAGGATCCAATGTCCAATGATCCAATCCCAAATTGCTATACAAACTCGGATCAAGGAAATTATGAACTAGAGACTTCATACATGCCGCCTGCAGACCTAAGCCAGATGTGGATGCCTAATGTTCCTAATATGAATGAAGTGAACTTGAGTCTTCCCAACAACATGGGATCAATGGTTTCAAATGTGTATGAAACCAACTTGAGTCATCCCAACTACATGGGATCAATGGTTTCAAATGTGTATGAAACCAACTTGAGTCATCCCAACTACATGGGACCAATGACTCCAAACATGGATGGAATGAACTTGAATCTTCCTAACTACACAGGATCAATGGCTCCTTCAGATATGAATGCAATGCAATTTAGTCTTCCCAACAACATGGGACAAATGGTTCCAATCATGGATGAAACAAACTTGAATCTTCCCAATTTCATGGGATCAATGGCTCCAGAAATGAATGAAATGAACTTTAGTCTTCCCAGCAACATAGGATCAATGGCACCAAATCCTCCAAGTGGAACTTTCCCAAATCCGAACCTTGATTAG 1143 0.3885 MENNKIGHSKENMVASKPPLIPILSFQSLQKTFYRDAPGTSNSTPQNENNRLENPADINPALVASESTPKLIVDQTQAKSPDADLKKLRRMESNRLSSRRSWMKKLIYLTNLENQVKNLEDQLAQLRPQIASHESQKQFLMLEKQTMLQRMEILEKEINFRESDLEMKKEQVKYLRESYPMNQAKQLQEQFLNWNIGLQDPMSNDPIPNCYTNSDQGNYELETSYMPPADLSQMWMPNVPNMNEVNLSLPNNMGSMVSNVYETNLSHPNYMGSMVSNVYETNLSHPNYMGPMTPNMDGMNLNLPNYTGSMAPSDMNAMQFSLPNNMGQMVPIMDETNLNLPNFMGSMAPEMNEMNFSLPSNIGSMAPNPPSGTFPNPNLD* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1692 380 Gene3D - 85 149 - -
Gso11g1692 380 PANTHER - 266 289 - -
Gso11g1692 380 PANTHER - 1 271 - -
Gso11g1692 380 MobiDBLite consensus disorder prediction 359 380 - -
Gso11g1692 380 MobiDBLite consensus disorder prediction 35 54 - -
Gso11g1692 380 Pfam bZIP transcription factor 83 138 IPR004827 GO:0003700|GO:0006355
Gso11g1692 380 PANTHER BASIC LEUCINE ZIPPER 34 1 271 - -
Gso11g1692 380 PANTHER BASIC LEUCINE ZIPPER 34 266 289 - -
Gso11g1692 380 CDD bZIP_plant_GBF1 87 132 IPR045314 GO:0003700|GO:0006355
Gso11g1692 380 SUPERFAMILY Leucine zipper domain 85 140 IPR046347 GO:0003700|GO:0006355
Gso11g1692 380 Coils Coil 109 171 - -
Gso11g1692 380 SMART brlzneu 82 153 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1692 Gso-Chr11 21978478 21981695 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1692 84 165 bZIP Transcription Factor Family AT3G58120 29.268 3.08e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso11g1692 bZIP_1 3.7e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1692 - K13172 gsj:114374067 770.385