Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1689 ATGGAAGAACGGTGGAGATTCATCACTTGGTTGAAGCTCTTCCGCGTGTTTGTGGCGGTTGTGTCTCTGTCCCCCTTCAGCATGCAACCTATTTGGTGTACGACTCTCAACAATGAAGGGTTGGCTCTACAAAAGATGAGGGAGAGGGTGGTGATAGATCGATTGGGTGGTTTATCAAGTTGGAATAGCAAAGAGGGAGAGATTGATCCCTGTTCCTGGTTCGGAGTTGAGTGCTCCCACGGCAATGTTGTATCCTTGAACTTGAAAGATCTATGTCTCCATGGAACACTAGCACCTGAAATTGGGAAGCTGGTTCACGTTAAATCAATCATTTTCCGTAACAATTATTTCTACGGAGACATCCCTAAGGAGATACTACAATTAGAGGACCTGGAAGTTCTTGACTTAGGATTTAACAACTTTAGTGGGCAATTTCCATTTCATGACCTTGCAAGTTATCCATCCCTGACTACCCTTTTATTGGACAACAATGACAATCTTGCTAGCTTAACTCCAGAAGTTTATGAGCTCAAGACATTTTCTGAATTGCATGTAGATGAAGAACAACTAACTGGTGCCACCACTAGAGAAGCATGTGCTAGCATAACTAATAACTGGCACATTGGTCAACATGGGGATATAGCATCCAGAAGGAAACTTCTCCAAGCAGCAAATCGTTCTAAGAGAGGTGATGATGAAAAAGAAACTCTTTCACCATCACCATTTCCCTCTACACTATCACCAGTTCTTGAGCCTTTCTCATCATCCGAGAGTCCCTCAGATTCACCAATATCATCTCCAGAAATTTCCCATTCACCATCTCCATCTCTCTCCACTTTCTTTTTCATTCTCTCACCCTCACCTTCACCTGAGGTAGCACCAACTCCAGACTTATCACCTCCAGCAAATCCACCAATGGTTGTGTTCACACCACCACAGTCCAATTGGGGTTCAATGCCTTCTCCTGCTTCATCTTCAAACCAAGGGAATGCATACAGTTCAAATACAAAGCAACATACTGTGATTATTTGGTCTACAGTTGGGGGCTTCTCCTTCTTGATTTTGGTTTCTGCCATTGTTTTTGCTTGCTTCAGAAGTAATAAGGTTGTAACTGTAAAACCTTGGGCCACAGGGTTGAGTGGCCAGCTGCAGAAAGCATTTGTATCAGGTGTTCCGAGTCTGAAGCGAACAGAACTTGAAGTCGCTTGCGAAGATTTCAGCAATATTATTGGCTCACTACCTGAGGGGACTATTTATAAGGGGACTCTCTCCAGTGGAGTTGAGATTGCTGTAGCATCCTCTGCAGTGACTTCATCCCAAGACTGGTCCAAAAAGATGGAAACTCAGTTCCGAAAGAAGATAGAGATGTTGTCAAGAGTGAACCACAAGAATTTTGTGAATCTTATTGGATATTGTGAAGAGAATAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCAAATGGAACGCTATTTGAGCATCTACACATTAGAGAAGCAGAACAACTAGACTGGGGAATGAGAATGAGGATCGCTGTGGGAATAGCCTATTGTCTGGAGCACTTGCATCAACTGACACCACCCATTGCCTACAGAAACATACTATCTTCCTCTATGTACCTGACTGAAGACTATGCTGCTAAATTATCAGACCTTAGTTTGTGGACTGATATAGTCTCCACAAAGAAGGGCTCTGAAGCTCCACAGCTGTTGGAAACAGCTTCAGCATATATAAAGGCCAATGTTTACAGCTTTGGAGTACTATTGTTTGAATTGATTACTGGAAGAATTCCCTTTGCTATGGAGAATGGCTTATTTGAAGATTGGGCAGCGGAATATATGAAGGGGCAACCATTGAAAGACTTGGTGGACACAAGCCTCAACTCTTTGCAAGCAAATGAAATTGAGAAATGGGAAGAAGTGATCAACAGCTGTGTACATCAAGATCCTGAAAAAAGGCCTACTATGAGAGAGGTTACTGCTAAGTTGAAGGAAATCACTGCCATGGGGCCGGACGGAGCAACTCCGAAAGCATCTCCTCTTTGGTGGGCAGAAATAGAAATCATGCCCAGTGACTTAAGTTCAGAGGTTAAACCATGA 2103 0.4313 MEERWRFITWLKLFRVFVAVVSLSPFSMQPIWCTTLNNEGLALQKMRERVVIDRLGGLSSWNSKEGEIDPCSWFGVECSHGNVVSLNLKDLCLHGTLAPEIGKLVHVKSIIFRNNYFYGDIPKEILQLEDLEVLDLGFNNFSGQFPFHDLASYPSLTTLLLDNNDNLASLTPEVYELKTFSELHVDEEQLTGATTREACASITNNWHIGQHGDIASRRKLLQAANRSKRGDDEKETLSPSPFPSTLSPVLEPFSSSESPSDSPISSPEISHSPSPSLSTFFFILSPSPSPEVAPTPDLSPPANPPMVVFTPPQSNWGSMPSPASSSNQGNAYSSNTKQHTVIIWSTVGGFSFLILVSAIVFACFRSNKVVTVKPWATGLSGQLQKAFVSGVPSLKRTELEVACEDFSNIIGSLPEGTIYKGTLSSGVEIAVASSAVTSSQDWSKKMETQFRKKIEMLSRVNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWGMRMRIAVGIAYCLEHLHQLTPPIAYRNILSSSMYLTEDYAAKLSDLSLWTDIVSTKKGSEAPQLLETASAYIKANVYSFGVLLFELITGRIPFAMENGLFEDWAAEYMKGQPLKDLVDTSLNSLQANEIEKWEEVINSCVHQDPEKRPTMREVTAKLKEITAMGPDGATPKASPLWWAEIEIMPSDLSSEVKP* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1689 700 Gene3D Phosphorylase Kinase; domain 1 380 486 - -
Gso11g1689 700 MobiDBLite consensus disorder prediction 291 308 - -
Gso11g1689 700 Pfam Leucine rich repeat N-terminal domain 37 79 IPR013210 -
Gso11g1689 700 MobiDBLite consensus disorder prediction 238 272 - -
Gso11g1689 700 Gene3D Transferase(Phosphotransferase) domain 1 487 673 - -
Gso11g1689 700 SUPERFAMILY Protein kinase-like (PK-like) 387 664 IPR011009 -
Gso11g1689 700 MobiDBLite consensus disorder prediction 291 332 - -
Gso11g1689 700 MobiDBLite consensus disorder prediction 309 332 - -
Gso11g1689 700 Pfam Protein tyrosine and serine/threonine kinase 408 664 IPR001245 GO:0004672|GO:0006468
Gso11g1689 700 SUPERFAMILY L domain-like 59 195 - -
Gso11g1689 700 PANTHER PROTEIN MALE DISCOVERER 2 1 691 - -
Gso11g1689 700 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 691 - -
Gso11g1689 700 MobiDBLite consensus disorder prediction 224 272 - -
Gso11g1689 700 ProSiteProfiles Protein kinase domain profile. 404 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1689 700 Gene3D Ribonuclease Inhibitor 35 236 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1689 Gso-Chr11 21838843 21845949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1689 384 667 Receptor kinase-like Gene Family AT4G31110 35.410 3.27e-42 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gso11g1689 PK_Tyr_Ser-Thr 1.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1689 - - gmx:100801161 1315.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1689 11 21838843 21845949 Gso11g1689 11 21838843 21845949 ECH