Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1687 ATGTCTATGGCTGGTGAGCAAGGTGATAGATTCTCCTCCGTTACCATACCCCTTCTCGATGATGAAAAATTGCACCAAGTGAATGGTTCAGATGAGGCTTTGGTGTCCAAAACTTGTGTTCTGCACACACCTCATGTGGGTAATACCTCCTTTTTCATGACCTGCTTCCATCTCATTAATGCCCTCTCAGGAGTTGGTATTATTTCCATGCCTTATGCACTGGCATCTGGGGGATGGTTAAGCATATCCCTACTATTTGTGATTGCCATTGCTTGTTGTTACACTGGCATTTTGGTCAAAAGATGCATGGATATGGACCCTGTTATCAAGAATTTTCCTGACATAGGTCAACGTGCATTTGGCGACAAGGGAAGGATAATAGTATCAATTGCTATGAATTCTGAGCTCTACCTAGTTGTAACAGGTTTTCTGATTTTAGAGGGTGACAATCTCGACAAACTAGTACCAAACATGCAACTTGAACTTGCAGGGTTAACAATTGGTGGTACATCAATTTTTACCATGATTGCTGCCCTTGTTATTTTGCCTAGTGTTTTGTTGGAGGATTTGAGCATGCTATCTTATGTCTCTGCTAGTGGTGCATTGGCTTCTTCCATTTTCCTCCTTTCTATATTTTGGAATGGAACCATTGATGGCACAGGATTTCATGCAAAGGGAACAATTTTTAGATTGAGTGGAATACCTGCTGCTGTCAGTTTATATGCCTTCTGTTATAGTGCTCATCCTATCCTTCCTACTCTCTATAATTCTATGAGAGACAAAAGTCAGTTCTCCAAGGTGCTGTCTGCATGCTTTACCGTATGCACCCTTGGTTATGCAGCAGCAGGTGTTTTGGGCTACTTAATGTTTGGACAGGAGGTTGAATCACAAGTGACTTTGAACCTCCCAACAGGCAAGTTCAGTTCACATGTGGCAATATTCACTACCTTGGTCAATCCTATAACCAAATATGCATTGATGCTTACTCCAGTCATAAATGCTGTAAAAAACAAAGTTTCATGGCATTACAACAAAAGGTTCACACATATGTTTGTCAGTACTTCCATGCTCATTAGCACTCTTATTGTAGCCGTGGCAATTCCCTTGTTTGGATATCTCATGTCACTCATTGGGGCATTACTAAGTGTCTCAACTTCAATTTTAATGCCATCAGTGTGCTACTTGAAGATTTCAGGAGCTTACAAGAGATTTGGGTCTGAAATGATCATCAATTATTCAATAATAATAATGGGGGTTACTATTGCTGTTGTGGGTACTTATACATCTCTTGTAGATATAGTTCATAATTTGTAA 1314 0.4011 MSMAGEQGDRFSSVTIPLLDDEKLHQVNGSDEALVSKTCVLHTPHVGNTSFFMTCFHLINALSGVGIISMPYALASGGWLSISLLFVIAIACCYTGILVKRCMDMDPVIKNFPDIGQRAFGDKGRIIVSIAMNSELYLVVTGFLILEGDNLDKLVPNMQLELAGLTIGGTSIFTMIAALVILPSVLLEDLSMLSYVSASGALASSIFLLSIFWNGTIDGTGFHAKGTIFRLSGIPAAVSLYAFCYSAHPILPTLYNSMRDKSQFSKVLSACFTVCTLGYAAAGVLGYLMFGQEVESQVTLNLPTGKFSSHVAIFTTLVNPITKYALMLTPVINAVKNKVSWHYNKRFTHMFVSTSMLISTLIVAVAIPLFGYLMSLIGALLSVSTSILMPSVCYLKISGAYKRFGSEMIINYSIIIMGVTIAVVGTYTSLVDIVHNL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1687 437 Pfam Transmembrane amino acid transporter protein 48 429 IPR013057 -
Gso11g1687 437 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 3 435 - -
Gso11g1687 437 PANTHER OS05G0424000 PROTEIN-RELATED 3 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1687 Gso-Chr11 21729917 21733824 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1687 41 434 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.430 7.56e-154 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1687 K15015 - gmx:100804353 842.032