Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1683 ATGCCTATGGCTGGTGAGCAAGGTGATAGATTCTCCTCCATTACCATACCCCTTCTCGATGATGAAAAATTGCACCAAGTGAATGGTTCAGATGAGGCTTTGGTGGCCAAAACTTGTGATCTACACACACCTCATGTGGATAACACCTCCTTTTTCAAGACCTGCTTCCACCTCATTAATGCCCTCTCAGGAGTTGGTATTATTTCCATGCCTTATGCACTGGCATCTGGGGGATGGTTAAGCATATCCCTACTATTTGTGATTGCCATTGCTTGTTGTTACACTGGCATTTTGGTCAAAAGATGCATGGATATGGACCCTGATATCAAGAATTTTCCTGACATAGGTCAACGTGCATTTGGCGACAAGGGAAGGATAATTGTATCAATTGCTATGAATTCTGAGCTCTACCTAGTTGTAACAGGTTTTCTGATTTTAGAGGGTGACAATCTCGACAAACTAGTACCAAACATGCAACTTGAACTTGCAGGGTTAACAATTGGTGGTACATCAATTTTTACCATGATTGCTGCCCTTGTTATTTTGCCTAGTGTTTTGTTGGAGGATTTGAGCATGCTATCTTATGTCTCTGCTAGTGGTGCATTGGCTTCTTCCATTTTCCTCCTTTCTATATTTTGGAATGGAACCATTGATGGCACAGGATTTCATGCAAAGGGAACAATTTTTAGATTGAGTGGAATACCTGCTGCTGTCAGTTTATATGCCTTCTGTTATAGTGCTCATCCTATCCTTCCTACTCTCTATAATTCTATGAGAGACAAAAGTCAGTTCTCCAAGGTGCTGTCTGCATGCTTTACCGTATGCACCCTTGGTTATGCAGCAGCAGGTGTTTTGGGCTACTTAATGTTTGGACAGGAGGTTGAATCACAAGTGACTTTGAACCTCCCAACAGGCAAGTTCAGTTCACATGTGGCAATATTCACTACCTTGGTCAATCCTATAACCAAATATGCATTGATGCTTACTCCAGTCATAAATGCTGTAAAAAACAAAGTTTCATGGCATTACAACAAAAGGTTCACACATATGTTTGTCAGTACTTCCATGCTCATTAGCACTCTTATTGTAGCCGTGGCAATTCCCTTGTTTGGATATCTCATGTCACTCATTGGGGCATTACTAAGTGTCTCAACTTCAATTTTAATGCCATCAGTGTGCTACTTGAAGATTTCAGGAGCTTACAAGAGATTTGGGTCTGAAATGATCATCAATTATTCAATAATAATAATGGGGGTTACTATTGCTGTTGTGGGTACTTATACATCTCTTGTAGATATAGTTCATAATTTGTAA 1314 0.4018 MPMAGEQGDRFSSITIPLLDDEKLHQVNGSDEALVAKTCDLHTPHVDNTSFFKTCFHLINALSGVGIISMPYALASGGWLSISLLFVIAIACCYTGILVKRCMDMDPDIKNFPDIGQRAFGDKGRIIVSIAMNSELYLVVTGFLILEGDNLDKLVPNMQLELAGLTIGGTSIFTMIAALVILPSVLLEDLSMLSYVSASGALASSIFLLSIFWNGTIDGTGFHAKGTIFRLSGIPAAVSLYAFCYSAHPILPTLYNSMRDKSQFSKVLSACFTVCTLGYAAAGVLGYLMFGQEVESQVTLNLPTGKFSSHVAIFTTLVNPITKYALMLTPVINAVKNKVSWHYNKRFTHMFVSTSMLISTLIVAVAIPLFGYLMSLIGALLSVSTSILMPSVCYLKISGAYKRFGSEMIINYSIIIMGVTIAVVGTYTSLVDIVHNL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1683 437 Pfam Transmembrane amino acid transporter protein 48 429 IPR013057 -
Gso11g1683 437 PANTHER OS05G0424000 PROTEIN-RELATED 3 435 - -
Gso11g1683 437 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 3 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1683 Gso-Chr11 21691226 21695200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1683 40 434 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.293 5.23e-155 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1683 K15015 - gmx:100804353 858.596