Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1679 ATGGCCGCAGCTTTGGAGTGCTGGTCGCGCCGCGCCACCACCACCGTCGACGAGGACCACGCCGTCCTCATGCAGCCACCCGAACAGGACCCAACAATACCCCAACCAAGAGACTCTTCTTCTTCTTCCATTGTTCACAAGAAGCTTCAAAAACTCACGCGCAACGTCTCCGAAGCCATTGCTTCCCTCAAAAACTCCCTTAACAGCAGCAGCACCGTTAGCGTCGAGTCCTCCAAACCCGACGCGCCTCGCAGCCTCGTGTGGACCACCGTCCTCCGCCACCTCATCCACCTCTACCCCGGTTCCCAGCTCCCCGAGAAGTTAGTGTGCAACATTCGCAAGCACTATGATTCCTTGCCTCTCAGTTATTCTAAGGCAGGGTTTGAAGTGAAAGATGTGTTTCTTCACATGAAGCTGATGGAGCAAGCTTTGGAGGATGAGCAGGCTGCAATTTTGATTCAAGAGGAGTGTGATGATGAGATTCAGCTTCAGGGGTCAGTGTTCAAGTTGACATTTGCTTGCAACTCTCCAATTTCATGGCCTGCGATGTCAGGTGCATTGGATGCTTACTCCATTTGCTGCAAGAAGATTCAGATCTTTGAGAAGAAATGTTTCACCCTTGGGATTGTGCTTCTTCTTGTTCTGTCTGGTGGTGGGCAAGATAAGTTGGTCAGAACCCGGGTTGAAAGCGCTCTCAAGATTGCCATGAAGAGGCCCAAAGCCGGTGGCGTGAAGCTGCCCTTTGGGCTTTGTGGATGTCAAGAGGAGAACTCCAAGGGGAGAAGACTTGGAGAGATTGAAGAAGATGGATGGGATGCATATTGTGGAAATGGATTTGAGAATTTGAGCCAAAAGATTGAGCTTCAAGTGCCATTGCCTAGTTCATCTTTTCTTGTAGTGGTAGATGAATGGCAGACTATTCAATCAGGTGGGGCTGAGATTGAAAAATGGTTGTTGAACTCAGATAGTCTTGAGTTTGTAGAACAGATTGCGCCCAATTCGTATAAGGGGACATACATGGGGAAAAAGGTCGGCATTGAGAAGCTCAGAGGGTGTGAGAAAGGGAACTCTTATGAGTTTGAGCTCAGGAAAGATCTGCTGGCACTGATGACTTGTGGGCATAGAAATATTATGCAGTTTTGTGGTGTTTGTGTAGATGACAACCACGGGTTATGTGTAGTGACAAAATTTGTTGAAGGTGGATCTGTTCATGACTTAATGTTAAAGAACAAGAAGCTTCCAAGTAAGGATATTGTAAGAATTGCAGCTGATGTAGCTGAGGGGATCAAGTTTAAGAATGATCACGGTGTTGCATACAGAGATCTTAATACGCAGAGGATTCTGTTGGATAAGCATGGGAATGCTTGCTTGGGTGATATGGGCATTGTCACTGCCTGCAAGAATGTCGGAGAGGCAATGGATTATGAAACTGATGGTTATCGATGGCTAGCACCAGAGATAATTGCTGGTGACCCAGAGAGTGTGACTGAGACATGGATGAGTAATGTTTATAGTTTTGGCATGGTAATTTGGGAGATGGTAACTGGTGAGGCAGCATATTCTGCATTTTCACCAGTTCAAGCAGCAGTTGGCATTGCTGCTTGTGGCCTAAGACCTGAAATCCCCAAGGACTGCCCTCAAACTTTAAAGTCTCTCATGACAAGGTGCTGGAACAACACCCCTTCAAAACGCCCTAACTTCTCTGAAATTTTGGCCATTTTGCTGCGATCAAGCAACTACAATAGGTAG 1749 0.4706 MAAALECWSRRATTTVDEDHAVLMQPPEQDPTIPQPRDSSSSSIVHKKLQKLTRNVSEAIASLKNSLNSSSTVSVESSKPDAPRSLVWTTVLRHLIHLYPGSQLPEKLVCNIRKHYDSLPLSYSKAGFEVKDVFLHMKLMEQALEDEQAAILIQEECDDEIQLQGSVFKLTFACNSPISWPAMSGALDAYSICCKKIQIFEKKCFTLGIVLLLVLSGGGQDKLVRTRVESALKIAMKRPKAGGVKLPFGLCGCQEENSKGRRLGEIEEDGWDAYCGNGFENLSQKIELQVPLPSSSFLVVVDEWQTIQSGGAEIEKWLLNSDSLEFVEQIAPNSYKGTYMGKKVGIEKLRGCEKGNSYEFELRKDLLALMTCGHRNIMQFCGVCVDDNHGLCVVTKFVEGGSVHDLMLKNKKLPSKDIVRIAADVAEGIKFKNDHGVAYRDLNTQRILLDKHGNACLGDMGIVTACKNVGEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYSAFSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTRCWNNTPSKRPNFSEILAILLRSSNYNR* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1679 582 SUPERFAMILY Protein kinase-like (PK-like) 324 574 IPR011009 -
Gso11g1679 582 MobiDBLite consensus disorder prediction 16 44 - -
Gso11g1679 582 PRINTS Tyrosine kinase catalytic domain signature 395 408 IPR001245 GO:0004672|GO:0006468
Gso11g1679 582 PRINTS Tyrosine kinase catalytic domain signature 431 449 IPR001245 GO:0004672|GO:0006468
Gso11g1679 582 PRINTS Tyrosine kinase catalytic domain signature 501 523 IPR001245 GO:0004672|GO:0006468
Gso11g1679 582 PRINTS Tyrosine kinase catalytic domain signature 545 567 IPR001245 GO:0004672|GO:0006468
Gso11g1679 582 PANTHER SERINE-THREONINE PROTEIN KINASE 1 578 - -
Gso11g1679 582 ProSiteProfiles Protein kinase domain profile. 286 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1679 582 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 578 - -
Gso11g1679 582 Pfam Protein tyrosine and serine/threonine kinase 356 573 IPR001245 GO:0004672|GO:0006468
Gso11g1679 582 Gene3D Transferase(Phosphotransferase) domain 1 318 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1679 Gso-Chr11 21450123 21454395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1679 315 574 MAP Kinase Kinase Kinase AT2G17700 33.585 3.03e-51 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Gso11g1679 PK_Tyr_Ser-Thr 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1679 - - gmx:100819097 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1679 11 21450123 21454395 Gso11g1679 11 21450123 21454395 ECH