Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1670 ATGCTTGAGATTGTGCTGCGGCTTAGTGTTTTCTTCCTCTTCATTACACACATCAAAAGACAACACAAAAATATAATCTTTGGTTCCTTAATTGGTTTTTCGTCAGTAGTATTAATTGTACGTATCTTCGAAATGGGGGGTACCTCACCTTGTGCTTCTTGCAAGTTGTTGAGACGCCGTTGCTCCAAAGACTGCATCTTTGCTCCTTACTTTCCTTCTGATGACCCTCGCAAGTTTTCCATTGTGCATAAGGTCTTTGGTGCCAGCAATATCAGCAAAATGCTGCAGGAGCTTCCAATTCATCAAAGAGCAGATGCTGTGAGTAGTTTAGTTTATGAGGCAAATGCAAGAGTTAGAGACCCTATGTATGGATGTGTTGGAGCCATATCATACCTACAAAACCAAGTTTCACAATTGCAAATGCAGCTTGCAGTGGCTCAGACAGAGATTTTATGCATCCAGATGCAGCAACAAGAGCCTACCTTAGCCACACAATTAGTAGACCAAGATGACAAATCAATGCTCCTATCTGTAAACAATAACTATGAAATGCTTCCTCAGTTTCTTAAGTTTCCTTCATCCTCTTCCTCATCTTCCAATGTATTCCAAGACCCTGATGAGCCTCTTAAGAGAGAGTCTTTTTGGACTTGA 651 0.4101 MLEIVLRLSVFFLFITHIKRQHKNIIFGSLIGFSSVVLIVRIFEMGGTSPCASCKLLRRRCSKDCIFAPYFPSDDPRKFSIVHKVFGASNISKMLQELPIHQRADAVSSLVYEANARVRDPMYGCVGAISYLQNQVSQLQMQLAVAQTEILCIQMQQQEPTLATQLVDQDDKSMLLSVNNNYEMLPQFLKFPSSSSSSSNVFQDPDEPLKRESFWT* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1670 216 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 46 213 - -
Gso11g1670 216 MobiDBLite consensus disorder prediction 192 216 - -
Gso11g1670 216 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 46 213 - -
Gso11g1670 216 Coils Coil 129 149 - -
Gso11g1670 216 Pfam Lateral organ boundaries (LOB) domain 50 147 IPR004883 -
Gso11g1670 216 ProSiteProfiles LOB domain profile. 49 150 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1670 Gso-Chr11 21234647 21236265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1670 47 216 AS2 family AT2G30130 64.211 9.06e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso11g1670 LOB 2.1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1670 - - gmx:100780073 421.009