Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1669 ATGTCGAAGGTGGTTTGTGTCACCGGAGCCAGCGGCGCCATCGGATCATGGGTGGTCCTCCTCCTCCTCCAGCGTGGTTACACCGTCCATGCCACCGTCCAAGATATCAAGGATGAAAATGAGACGAAACATTTGGAGGAAATGGAAGGAGCAAAGAGTCATCTCCATTTTTTTGAAATGGATCTTCTTGACATCGACTCCATTGCCGCTGCCATAAAGGGTTGTTCCGGCGTAATCCACCTTGCATGTCCTAACATCATTGGTCAAGTCGAAGATCCCGAGAAACAGATATTGGAACCGGCGATAAAAGGAACGGTTAATGTGTTGAAGGCGGCGAAGGAAGCAGGGGTGGAGCGCGTGGTGGCGACTTCATCGATTTCGTCGATTATGCCAAGTCCTAATTGGCCAGCTGATAAGATTAAGGGAGAAGAGTGTTGGACGGACCTTGAATACTGCAAGCAAAAGGGGTTGTATTATCCCATTGCAAAGACTCTAGCAGAGAAAGCGGGTTGGGACTTTGCGAAGGAGACAGGTTTTGATGTTGTCATGATAAACCCTGGTACAGCATTGGGCCCTCTGCTTCCTCCAAGAATCAATTCAAGCATGGCTGTGCTTGTTAGTGTTCTCAAAGGGGGCAAAGAGACCTACGAGGACTTCTTTATGGGAACGGCTCACTTCAAAGACATAGCATTGGCACATATTTTGGCACTTGAGAACAAGAAAGCAGCAGGAAGGCACTTGTGTGTGGAATCTATTCGTCACTTTAGTGATCTTGTGGACAAGGTTGCTGAGTTATACCCTGAATACGATGTGGCTAAGTTGCCAAAGGATACCCAACCAGGGTTGTTGAGAGCAAGTGGAAAGGATGCATCAAAGAAGCTGATTGATTTAGGTCTAGAATTCACTCCTGTTGAGCAAATCATCAAGGATGCAGTGGAGAGTTTGAAGAGCAGGGGCTATGTCTAA 966 0.4741 MSKVVCVTGASGAIGSWVVLLLLQRGYTVHATVQDIKDENETKHLEEMEGAKSHLHFFEMDLLDIDSIAAAIKGCSGVIHLACPNIIGQVEDPEKQILEPAIKGTVNVLKAAKEAGVERVVATSSISSIMPSPNWPADKIKGEECWTDLEYCKQKGLYYPIAKTLAEKAGWDFAKETGFDVVMINPGTALGPLLPPRINSSMAVLVSVLKGGKETYEDFFMGTAHFKDIALAHILALENKKAAGRHLCVESIRHFSDLVDKVAELYPEYDVAKLPKDTQPGLLRASGKDASKKLIDLGLEFTPVEQIIKDAVESLKSRGYV* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1669 321 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 313 - -
Gso11g1669 321 Pfam NAD dependent epimerase/dehydratase family 5 245 IPR001509 -
Gso11g1669 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 315 IPR036291 -
Gso11g1669 321 CDD FR_SDR_e 5 299 - -
Gso11g1669 321 Gene3D - 1 321 - -
Gso11g1669 321 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1669 Gso-Chr11 21193837 21199082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1669 3 321 Monolignol Biosynthesis Gene Families AT5G58490 65.517 5.05e-164 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1669 - - gmx:100806281 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1669 11 21193837 21199082 Gso11g1669 11 21193837 21199082 ECH