Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1660 ATGGATATTGAAAGGAAAGATCAATTGAGTTCTTATGGAATGATTGGCAATGAGAAATTCGTATGCCAATATGTTTTGAAACACACAAGCAGAGGTGTTTGGTATGGAGACAATCCCCTTCATCATGACACATCTGTCTTATTTATCGAGATTATTGTTATGTATATTGTCGGTAGAATCACTTATCTCTTGTTAAGGCCTTGTCATCAAACCTTTCTTATTTCACAGATTGTGGCTGGAATCATACTGGGCCCTTTATTTCTAGGTCAACACAATTCAAGTTATGAGATGATATTTCCAACAGCAAGCAAAATGACACTCACAACATTTGCAGAATTTGGCATGATAATCCATTTCTTTCAAATAGGGGTGCAAATCAATCCCATGCTAATCTTAAAGATAGAAAAGCAAGCAATAGCAATTGGTCTAATAGGAAACATATCTTCTATAGCACTTGGTGGTATAATTTTCAATATTGTTAAAGGAATGTACCCTGAAGGGATGGAAAACACTGGTATTCATGTTTTAGTGATATCATCTTCAGTGTCTACATTTCCTGTTATTAGTGGCTTCCTTGCTGAGATGAACATTCTTAATTCAGAAATTGGACGCATGGCTATATCCATTTCCATGATTAGTGATTTATGCATGTGGGTAATGTATTTTGTGGTAATCAATAGTGCTAAAGCAGTGGAACAACAAACATATAAACCTATTACAGAAATAGCTGTGACAATTTGTTATTTCTCCATCTTATTCTTTTTTCTAAGGCCGTTGGTTATATGGATCTCCAACCGCAATCCACAAGGAAAGCCTATGACAGAAAGTCATTTCTTATCAATCATTTGTATATTACTATTTGTTGGATTCTCTGCAAGTATGTTAGGCCAACCTCCATTCCTTGTTGCGTTTTGTTTTGGCTTGATCTTACCGGATGGTCCCCCATTAGGTTCTGTCCTGGCAGAAAGACTTGACACTGTTGGTTCTACTTTTATGGTTCCATCTTATTGTACTATTACTGGCCTCAGGACTGATGTTCCTTCATTAGTAGAATCCAAGACAGTAACCATAGAGGTTATCTTAATTTCAACATACGTAGGAAAGTTTATGGGAACCATTTTACCATCGCTTCACTTTCATATTGAATTTTGGGATTCTTTTGCACTAGCTCTAATCATGTGTTGCAAAGGCCTTGTTGATCTTTGCGTCCTCAACATGTTATTGAATGTTAAGGCAATAGAAGAACTACCTTTCACCCTTGCTATATTTACTATGGTGGCCATAACTGGATTGGCATCTATAGTTGTTCATTACATATATGATCCTTCAAGGAGGTATAAAGCATATATTAGAAAGACAATTAAGGATGGACAACATGAACCTGATATCAAAATACTTGTTTGTGTTCACAATGAAGAAAATGTATATCCAATGATCAACCTTCTCCAAGCCTCCAACCCTACAAATGTTACGCCCATTTCAATCTTTGTCCTACATCTTATAGAGCTCTCAGGCAGGGCAATTTCCACTCTCACAAAAAATAAGAGTACTAACAAGTCATCTCAACACATAAAGAACGCCTTTGATCAATTTCAAATGCATAACAGAGGGTGTGTCATGTTGCAATATTTCAATGCAATTACCCCATATTTAAGCATGCACGATGATATATGCTACATGGCAATGGACTCCAAGTCTAACATTGTGATTATGCCATTTCATAAGCAATGGTCCATCAATGGAAATGTTGAGTACTCCAATGCTTCAATTAGGATACTAAACCAAAATGTTTTAAGGAAAGCTCCTTGCTCAGTTGGAATCTTTATAGATCGAAGCCAAATGAATGGCAAACTCTTAGTCATATATGAGAAGTCATTTTGTGAAATTGCCATGGTCTTCTTAGGTGGAGGTGATGACCAAGAGGCCTTGGCTTATAGTTTACGCATAGCTCAACATCCAAATGTGAGACTAACAGTCTTTTGGATAACATTTAAAATACAAGGCAACAAAAGGAAAACAAAGAATCCTTACATTGACTTGATGGAGCACATACGTTATAGTAGTTACCATGAAGGCAAAGTAACATTCAAGGAAGAGATTGTGGAAGATGGAGAAGGAACAACACAAGTTATTCGAAGCATAGAAGGACAATATAAGTTGGTCGTAGTCGGTAGACATTACATTAAAGACTCTCCATGTACACTAGGCTTGACAGAATGGTGTGAACTTCCTGAGCTTGGTCCACTTGGGAACCTCTTAGCCACATCAGATTTTACATTTTCAGTTTTGGTTGTGCAACAACAACCCCCCTTTAATCATGAATATCGGTATATTAGGTGA 2340 0.3684 MDIERKDQLSSYGMIGNEKFVCQYVLKHTSRGVWYGDNPLHHDTSVLFIEIIVMYIVGRITYLLLRPCHQTFLISQIVAGIILGPLFLGQHNSSYEMIFPTASKMTLTTFAEFGMIIHFFQIGVQINPMLILKIEKQAIAIGLIGNISSIALGGIIFNIVKGMYPEGMENTGIHVLVISSSVSTFPVISGFLAEMNILNSEIGRMAISISMISDLCMWVMYFVVINSAKAVEQQTYKPITEIAVTICYFSILFFFLRPLVIWISNRNPQGKPMTESHFLSIICILLFVGFSASMLGQPPFLVAFCFGLILPDGPPLGSVLAERLDTVGSTFMVPSYCTITGLRTDVPSLVESKTVTIEVILISTYVGKFMGTILPSLHFHIEFWDSFALALIMCCKGLVDLCVLNMLLNVKAIEELPFTLAIFTMVAITGLASIVVHYIYDPSRRYKAYIRKTIKDGQHEPDIKILVCVHNEENVYPMINLLQASNPTNVTPISIFVLHLIELSGRAISTLTKNKSTNKSSQHIKNAFDQFQMHNRGCVMLQYFNAITPYLSMHDDICYMAMDSKSNIVIMPFHKQWSINGNVEYSNASIRILNQNVLRKAPCSVGIFIDRSQMNGKLLVIYEKSFCEIAMVFLGGGDDQEALAYSLRIAQHPNVRLTVFWITFKIQGNKRKTKNPYIDLMEHIRYSSYHEGKVTFKEEIVEDGEGTTQVIRSIEGQYKLVVVGRHYIKDSPCTLGLTEWCELPELGPLGNLLATSDFTFSVLVVQQQPPFNHEYRYIR* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1660 779 Gene3D - 45 449 IPR038770 -
Gso11g1660 779 Pfam Sodium/hydrogen exchanger family 52 436 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso11g1660 779 PANTHER CATION/H + ANTIPORTER 33 769 - -
Gso11g1660 779 PANTHER CATION/H(+) ANTIPORTER 14 33 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1660 Gso-Chr11 20879827 20883369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1660 18 768 Antiporter Super Family AT1G06970 37.549 2.78e-176 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1660 - - gmx:100787550 1553.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1660 11 20879827 20883369 Gso11g1660 11 20879827 20883369 ECH