Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1652 ATGCCTTCTACTACTCTTCAATGGCTAAGCCTAGTTGGCATCATTTGGCTCCAAGCCATAATTGGCACAAACACCAATTTCCCTGCTTACTCTTCTCAGCTGAAGCAACTTCTATCTATTTCCCAAGTTCAACTCAATAACCTTGCTTTTGCATCTGATGCAGGCAAGCTTTTTGGCTGGTTTTCTGGCCTTGCTTCTATATACCTCCCCCTTTGGTTGGTCCTTTTTATTGGTTCAACTCTTGGATTAGTAGGTTATGGTGTGCAATATCTCTTCATAACCAACCAAATTTGTTCTTTGTCCTATTGGCATGTGTTCTTGCTAACTTTTCTTGCCGGCAATAGCATTTGTTGGATCAACACAGTGTGCTATGTTGTCACCATAAGGAACTTCTTTTCTGATCGCCTAGTTGCTGTGGGAATAACAACTAGCTACCAAGGACTAAGTGCAAAGATTTATGCCAACATTGTTGATGCTGTTTCTCCTCACAAGAAGGCTAGAACGTTTCTCTTCCTCAACTCTCTCTTACCTGTGATAGTTGGTTTAATAGCAGCTCCTCTAGTCAGAGAAATTGATGAAGTAACAAGTCCTAATAGGTACACACGTGTTGGTTTTGCTGTGATGTTTGTTATTACAATTTCAACTGGAACATATGCTGTGTTGAGCAGCTTGCAATTTGTCACAAGCAAAGCATCCTCACTAGGTATCTTGATTGGTATTCTACTGTCCTTTCTATTGCCTCTGCTTGTCCCTCTCTCAATGAAGATCAAGAAGTTTCAGGAAAATAGAGAAAAATTGAGAATCTACCACTATACTATGGAGGAGAATGCTACTAGTGAAGAGAGGGTGGAGAGCGAGGTGAAAGAGGGTGAAGTAGTTCAAGAAGAGTTTGGTATTATAGAAGAAGTTGGAGTGAAGTTAATGCTGAGAAGAATAAATTTCTGGTTATATTTCTCTGTCTATTTTTTTGGTGCAACAGTTGGTTTAGTATATCTTAATAACTTGGGACAAATAGCTGAATCCAGAGGTTGCTCTAATACTTCATCTTTGGTGTCTTTGGCATCGTCATTTGGGTTCTTTGGCCGTCTCATGCCATCTCTTATGCACTACTTCTACAGGGGAAAATGTAGAATTTCAAGACCTGCTTCTCTGATGGCAGCGATGATTCCAACAACAGGTGCATTTCTGTTACTCCTCAACAAATCTGACATTGCTCTTTACATCAGCACTGCAGTGATTGGAGTGTGTACTGGAGCAATCACTTCTATTGCTGTTTCCACAACCACTGAGTTATTTGGTACTAAGAATTTCTCAGTGAACCATAATGTGGTGGTAGCCAACATTCCAATTGGCTCCTTTATATTTGGCTACTCTGCTGCACTTATTTACCATAAGGAAGGGAATGAACATGGGAAATGCATGGGCATGGAATGCTACAGAAACACTTTCATCATGTGGGGTTTCTTTTGTTTCCTTGGAACTCTTTTGGCCTTGATTCTACATGCTAGGACTCGCAAGTTTTTCTCACTAAAACAATAG 1539 0.4035 MPSTTLQWLSLVGIIWLQAIIGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGWFSGLASIYLPLWLVLFIGSTLGLVGYGVQYLFITNQICSLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFFSDRLVAVGITTSYQGLSAKIYANIVDAVSPHKKARTFLFLNSLLPVIVGLIAAPLVREIDEVTSPNRYTRVGFAVMFVITISTGTYAVLSSLQFVTSKASSLGILIGILLSFLLPLLVPLSMKIKKFQENREKLRIYHYTMEENATSEERVESEVKEGEVVQEEFGIIEEVGVKLMLRRINFWLYFSVYFFGATVGLVYLNNLGQIAESRGCSNTSSLVSLASSFGFFGRLMPSLMHYFYRGKCRISRPASLMAAMIPTTGAFLLLLNKSDIALYISTAVIGVCTGAITSIAVSTTTELFGTKNFSVNHNVVVANIPIGSFIFGYSAALIYHKEGNEHGKCMGMECYRNTFIMWGFFCFLGTLLALILHARTRKFFSLKQ* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1652 512 Pfam Nodulin-like 7 251 IPR010658 -
Gso11g1652 512 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 510 - -
Gso11g1652 512 CDD MFS_Mch1p_like 6 494 - -
Gso11g1652 512 SUPERFAMILY MFS general substrate transporter 8 506 IPR036259 -
Gso11g1652 512 Gene3D MFS general substrate transporter like domains 307 509 IPR036259 -
Gso11g1652 512 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1652 Gso-Chr11 20706174 20708736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1652 1 511 Nodulin-like Gene Family AT2G30300 48.084 9.23e-151 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1652 - - gmx:100793370 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1652 11 20706174 20708736 Gso11g1652 11 20706174 20708736 ECH