Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1645 ATGGCACTTTCTCCTATTCGTTCTTCTACTTTCTCTTCATCATCAGCTAATATTGTTACATTAGCTGTGTTACTTCTTCTTACAAGGACCTCTTCAGCTACCCTCTCAAAGAACTTCTATTCTAAGACATGTCCAAACGTTTTCAACACGGTAAAATCTGTAGTAAAATCTGCTGTGGCCAAAGAACCTCGCATTGGAGCTTCTATTGTTCGCCTCTTCTTCCATGACTGCTTTGTTCAAGGTTGTGATGGATCAATACTACTTGATGACACTCCAACCTTCCAGGGGGAGAAGACTGCAGCTGCTAACAACAATTCAGTGAGAGGTTATGAATTAATCGATGATATCAAGTCTAAGGTCGAGAAAATATGCCCCGGTGTGGTCTCATGTGCTGATATCTTGGACATTGCTTCTCGTGACTCTGTTGTTCTTCTTGGAGGACCATTTTGGAATGTTAGACTTGGAAGAAGGGATTCTAGAAGTGCCAATTTCACTGCTGCAAACACTGGTGTTATTCCACCTCCCACATCTAACCTCACCAACCTTATCACAAGGTTTCAAGATCAAGGACTCTCTGCTAGGGACATGGTTGCCTTATCTGGAGCTCACACATTTGGCAAAGCAAGGTGTACTAGTTTCAGAGATCGCATATACAATCAAACCAACATTGACAGAACATTTGCATTGGCCAGGCAGAGGAGGTGCCCTAGGACCAATGGCACAGGTGACAACAATCTAGCAAATCTAGACTTCAGAACTCCAAATCATTTTGACAACAACTACTTCAAAAACCTTCTCATTAAAAGGGGACTCCTCAATTCTGATCAAGTGCTTTTCAATGGTGGATCCACTGATTCACTGGTCAGAACATACAGCCAGAATAACAAGGCCTTTGATTCTGACTTTGTTAAAGCAATGATTAGGATGGGAGATATCAAACCCTTAACTGGGTCACAAGGGGAGATTAGGAAGAACTGCAGGAGAGTGAATTAA 993 0.422 MALSPIRSSTFSSSSANIVTLAVLLLLTRTSSATLSKNFYSKTCPNVFNTVKSVVKSAVAKEPRIGASIVRLFFHDCFVQGCDGSILLDDTPTFQGEKTAAANNNSVRGYELIDDIKSKVEKICPGVVSCADILDIASRDSVVLLGGPFWNVRLGRRDSRSANFTAANTGVIPPPTSNLTNLITRFQDQGLSARDMVALSGAHTFGKARCTSFRDRIYNQTNIDRTFALARQRRCPRTNGTGDNNLANLDFRTPNHFDNNYFKNLLIKRGLLNSDQVLFNGGSTDSLVRTYSQNNKAFDSDFVKAMIRMGDIKPLTGSQGEIRKNCRRVN* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1645 330 PANTHER PEROXIDASE 14 329 - -
Gso11g1645 330 Pfam Peroxidase 51 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 CDD secretory_peroxidase 35 329 IPR033905 GO:0004601|GO:0042744
Gso11g1645 330 Gene3D - 38 327 - -
Gso11g1645 330 PANTHER PEROXIDASE 72-RELATED 14 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 Gene3D Peroxidase, domain 2 173 309 - -
Gso11g1645 330 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Gso11g1645 330 SUPERFAMILY Heme-dependent peroxidases 35 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 ProSiteProfiles Plant heme peroxidase family profile. 34 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Gso11g1645 330 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g1645 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1645 Gso-Chr11 20410531 20415544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1645 18 330 Peroxidase AT5G58390 64.537 1.35e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1645 K00430 - gmx:100813250 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1645 11 20410531 20415544 Gso11g1645 11 20410531 20415544 ECH