Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1642 ATGGAGAGTAAGCCACATGTCTTAATGCATAGATATGAGTTAGGAAGATTACTTGGCCAGGGAACCTTTGGAAAGGTTTACTATGCTAGGAGTACAATAACTAACCAAAGTGTGGCTATTAAAGTGATTGACAAAGATAAGGTTATGAAAACTGGGCAAGCTGAACAAATCAAGCGTGAAATATCTGTTATGAGACTGGCCAGGCACCCCAATATTATACAGCTTTTCGAGGTTTTGGCTAACAAGAATAAGATTTACTTTGTTATAGAATGTGCTAAAGGTGGAGAGCTCTTCAACAAGGTGGCTAAAGGAAAACTCAAGGAAGATGTTGCACACAAGTATTTTAAGCAGCTAATCAATGCTGTAGACTATTGTCACAGTAGAGGTGTGTACCACCGAGACATTAAGCCCGAGAACATTCTATTGGATGAAAATGGGAATCTAAAGGTTTCTGACTTCGGTTTAAGCGCTCTCGTTGATTCCAAGAGGCAGGATGGCTTACTCCATACACCATGTGGCACACCTGCTTATGTTGCTCCTGAAGTCATCAAAAGGAAGGGATATGATGGTACCAAAGCTGATATATGGTCTTGTGGAATAGTTCTGTTTGTCTTGTTGGCAGGTTATCTCCCTTTTCACGACCCAAATTTGATAGAGATGTATAGGAAGATAAGCAAAGCAGAATTGAAATGTCCTAATTGGTTCCCACAAGAAGTATGTGAGCTATTGGGCATGATGTTAAATCCAAATCCTGACACTAGGATTCCCATATCTACTATTAGGGAAAATTGTTGGTTTAAGAAAGGACCAAATATAAAAAACAAAAGACCTGTAGTGGAAAATAGCACTGTCTCTTCTTCAAGTACAGTTCTTTCTGATCAAAATGACTGTGATGACATAGCAGCAGAAGCAAATGGGGAGTCAGTTGTGCCCTTAAGTATAAATGCCTTTGACATTATCTCCCGTTCTGTTGGTTTTGATCTTTCTCGATTCTTTGATGAAAGTTTTAAGAAAAAGGAAGCAAGATTTAGTTCAAGGTTACCAGCAAATGTCATCATCTCCAAGCTGGAAGACATTGCTAAGCAACTGAGGATGAAAATAAAGAAAAAAGCTGCTGGTTTGTTGAAATTAGAGAGCCTCAATGAAGGTAGGAAGGGAGTTTTATCCATTGATGCTGAGATCTTCGAGGTTATACCTTGTTTCCATATGGTGGAGGTGAAAAAATCAAATGGAGATACATTGGAATATCAAAAGATATTGAAAGAGGATATTAGGCCTTCTCTTCATGATATTGTTTGGGTCTGGCAAAGTGACCAACAACTGCAATCACAACAGTCAGAGCAACATCAACATACAGATGACCAGCAGCAACAACAACCACAGTCATAA 1389 0.3902 MESKPHVLMHRYELGRLLGQGTFGKVYYARSTITNQSVAIKVIDKDKVMKTGQAEQIKREISVMRLARHPNIIQLFEVLANKNKIYFVIECAKGGELFNKVAKGKLKEDVAHKYFKQLINAVDYCHSRGVYHRDIKPENILLDENGNLKVSDFGLSALVDSKRQDGLLHTPCGTPAYVAPEVIKRKGYDGTKADIWSCGIVLFVLLAGYLPFHDPNLIEMYRKISKAELKCPNWFPQEVCELLGMMLNPNPDTRIPISTIRENCWFKKGPNIKNKRPVVENSTVSSSSTVLSDQNDCDDIAAEANGESVVPLSINAFDIISRSVGFDLSRFFDESFKKKEARFSSRLPANVIISKLEDIAKQLRMKIKKKAAGLLKLESLNEGRKGVLSIDAEIFEVIPCFHMVEVKKSNGDTLEYQKILKEDIRPSLHDIVWVWQSDQQLQSQQSEQHQHTDDQQQQQPQS* 463
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1642 462 SUPERFAMILY Protein kinase-like (PK-like) 8 297 IPR011009 -
Gso11g1642 462 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1642 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Gso11g1642 462 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1642 462 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 452 - -
Gso11g1642 462 MobiDBLite consensus disorder prediction 443 462 - -
Gso11g1642 462 Gene3D Transferase(Phosphotransferase) domain 1 4 311 - -
Gso11g1642 462 CDD CIPK_C 315 428 - -
Gso11g1642 462 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Gso11g1642 462 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1642 462 PANTHER - 2 452 - -
Gso11g1642 462 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Gso11g1642 462 Pfam NAF domain 311 369 IPR004041 GO:0007165
Gso11g1642 462 Gene3D Kinase associated domain 1, KA1 312 434 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso11g1642 Gso-Chr11 20378906 20382064 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1642 1 439 CBL-interacting serine-threonine protein kinases AT5G58380 65.044 0.0 611
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso11g1642 Pkinase 4.4e-73 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1642 - K07198 gmx:100814847 848.966
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1642 11 20378906 20382064 Gso11g1642 11 20378906 20382064 ECH