Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1629 ATGAAAACAGTATATAAAGCAATTGATGAGATACTTGGACTTCAAGTAGCATGGAGCCAGGTCAGACTCAACGAGGCACTTCGCAAACCAGAGGACTTGGAGCGGCTTTATTTAGAGATTCTACACCTCTTGGATGATGTTGACAACAAGACCTTCAATTTCATTACAGAGATGTTTACTTCAGGGACACTGATAGAGAAGAAATACAAGCACATAGGCCTACAAGCAATAAAGAGTTGGACTTGCCAAATCTTACAGGGTCTTGACCTCAAATGTGGTAACATTTTTGTTAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTGGGTCTAGCAGCAATTCTCCATGGTTCTGAACCTGCTCACAGTGTTATAGGCACCCAAGAGTTCATGGCACCAGAATTCTATAAAGAAGAATACAATCAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTCTGGAAATGCTTACATCTGGTTATCCATATAGTGAATGTGCTAACCCTGCACAGATATACAAGAAAGTGACATCGAAGCACAAATGTTTATTGGCAAAATGTCTAATGACTGCAGCAAAGAGACCATCAGCAAAAGAATTGTTTAGTCATCCATTTCTTTTGTCTGATGATGCATCGTCCATGACAAAGATTGGAATTCAGAAACCCTTTTTAAATTACAATGAAATGGAAAAGCTTCAATTGAATGATGATTCACCTAGGACTGAAATGTCAATAACTGGGAAGCTAAATCCAGAACATCACAGTTTCTTTCTAAAAGTGCAAATTTCCGACAAGGATGGTTCTTGTAGGAATGTATATTTGCCCTTTGGCATATACAATGACACTCTAATTGATGATGCAATGGAGATGGTGAAGGAATTGGAGATCACAGATTTGAAGTCTTCTGATATTGCAAATATGATTGAAGGAGAGATCCATACATTCAATTATCACGATGACAACCACAACGAATGTCCTCGTCATCATTTCCACTCTGCCTCTTCTCGTTCATCATCCCAAGGATCAATATCAGGCTCAGTCAGTAGAGCTGATGGTTTATTGAATGAAGATTATTGGCTCCATGGTAATTCAATATGCTCTTGTACAGTGGATGATGACCAAAAGGAACACAATAAGGCTTCTATGAGAAAAGATAAATATCCCTGCAAAGTTTTTGCAGGACCACTAGCATCTTCTACTAGAAAAAATAAGAGGATGATAGACAATCATAGACTAACAAGGAACTGGTTATTGGTTGATATAAGGAGTCAGCTACTACACAGATCATTGGTTGAGGAGGTGAGCAAAAGAAAGTTATTCAAGACAGTTGGAGTTGTGGAAAATATTGGATTTATGACACCTTATTAG 1368 0.3838 MKTVYKAIDEILGLQVAWSQVRLNEALRKPEDLERLYLEILHLLDDVDNKTFNFITEMFTSGTLIEKKYKHIGLQAIKSWTCQILQGLDLKCGNIFVNGHLGQVKIGDLGLAAILHGSEPAHSVIGTQEFMAPEFYKEEYNQLVDVYSFGMCVLEMLTSGYPYSECANPAQIYKKVTSKHKCLLAKCLMTAAKRPSAKELFSHPFLLSDDASSMTKIGIQKPFLNYNEMEKLQLNDDSPRTEMSITGKLNPEHHSFFLKVQISDKDGSCRNVYLPFGIYNDTLIDDAMEMVKELEITDLKSSDIANMIEGEIHTFNYHDDNHNECPRHHFHSASSRSSSQGSISGSVSRADGLLNEDYWLHGNSICSCTVDDDQKEHNKASMRKDKYPCKVFAGPLASSTRKNKRMIDNHRLTRNWLLVDIRSQLLHRSLVEEVSKRKLFKTVGVVENIGFMTPY* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1629 455 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 455 - -
Gso11g1629 455 MobiDBLite consensus disorder prediction 326 347 - -
Gso11g1629 455 MobiDBLite consensus disorder prediction 332 347 - -
Gso11g1629 455 SMART serkin_6 3 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1629 455 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1629 455 Pfam Protein kinase domain 49 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1629 455 Gene3D Transferase(Phosphotransferase) domain 1 44 213 - -
Gso11g1629 455 PANTHER WNK KINASE 1 455 - -
Gso11g1629 455 SUPERFAMILY Protein kinase-like (PK-like) 3 248 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1629 Gso-Chr11 20134419 20140210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1629 1 438 MAP Kinase Kinase Kinase AT3G51630 45.219 9.51e-123 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gso11g1629 Pkinase 1.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1629 K08867 - gmx:100272208 906.746