Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1628 ATGGGAAATAACAGGTTTAGACTGTCAGATATGATGCCAAATGCATGGTTTTATAAGCTCAAAGATATGAGCAAATCAAGGAAGAGAAATGTTCCTCATGTTATGAAGAACAAAGTAGCCTCACCAACAACATCACAAAGGTCACAGCCAAGATACTCTCATTATTTCTCCATTGAACCAAACATAGCTGGTAAGTTATACAAGTCTCCTATTTTTTACACCAAACACTCAGATAACACTTTCACTGATTCACCAAGGTCATCCAAGAGAAAGGCTAAGAGAAAAACCATTTATAAGCCTTCTCCAACAGTTGTGTCTTCACCAGTCATGGAAAGTTTTAGTTGTCATTCCACAAACAATTGGATTAAGCCAAATGAACCGCAGTCTCCAGACTATTATCTCTCCTCCTTGGAGAGTTCTTTTTCTTCTGAATCAAACCTTAATGATGAATATGTTTCATCTGAGTCTGAGTGTGATAAGTTCACTATTCCTGACCTGCTTAATGGGGTAGCCTCTGAATGCAGCTGTAGAGTTAGCTCTTCCACCAATGACATCATCATTGACATGAAAAATGAACCCTTCACTGGAAATTCTGATAGCCTTGATGGCTTCGACACAATTTCACAATTAGGCCTTGCTCCAATTTTGACAAAGCCAGTGAAGTTTGATGATAAGGTCATTGAAGCCACTGAGTTGAGAAGATCAACTAAATTTGATGAGTTAAAGTCTCATCAGTCTCTATCTGTCAAAATTAGCAAAGAGGAAAGTAGAAGAAGTAAGAGAGAGAGAAAAACAAGTCCAGTAGCTAGAATTTCCTCTGCCAATTCTACAGGTATAAAACTTAGAGTCAATTCTCCAAAACTTGCAAGCAAGAAGGTTCAAGCCTATGCAAGGAGGAGTGTGTCATCCAATGCATGTAAGGCCTCAATGAATTCAGGATTTCCAAAGGGATTTGCAGTTGTTAAGTCCTCACTTGATCCACAAAGAGACTTCAGGGAGTCAATGGTGGAGATGATTGTAGAGAACAATATCCGCGCATCGAAAGATTTGGAGAACTTGCTTGCCTGCTATCTCTCACTGAATTCAAGGGAATACCATGATCTTATTGTCAAAGCATTTGAGCAAATTTGGTATGACATGGCTCAACTCAGAATGTAA 1158 0.3895 MGNNRFRLSDMMPNAWFYKLKDMSKSRKRNVPHVMKNKVASPTTSQRSQPRYSHYFSIEPNIAGKLYKSPIFYTKHSDNTFTDSPRSSKRKAKRKTIYKPSPTVVSSPVMESFSCHSTNNWIKPNEPQSPDYYLSSLESSFSSESNLNDEYVSSESECDKFTIPDLLNGVASECSCRVSSSTNDIIIDMKNEPFTGNSDSLDGFDTISQLGLAPILTKPVKFDDKVIEATELRRSTKFDELKSHQSLSVKISKEESRRSKRERKTSPVARISSANSTGIKLRVNSPKLASKKVQAYARRSVSSNACKASMNSGFPKGFAVVKSSLDPQRDFRESMVEMIVENNIRASKDLENLLACYLSLNSREYHDLIVKAFEQIWYDMAQLRM* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1628 385 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 384 IPR038933 GO:0045892
Gso11g1628 385 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 384 - -
Gso11g1628 385 Pfam DNA-binding domain 1 47 IPR025830 GO:0003677
Gso11g1628 385 ProSiteProfiles OVATE domain profile. 320 379 IPR006458 -
Gso11g1628 385 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 318 380 IPR006458 -
Gso11g1628 385 MobiDBLite consensus disorder prediction 249 267 - -
Gso11g1628 385 Pfam Transcriptional repressor, ovate 324 380 IPR006458 -
Gso11g1628 385 MobiDBLite consensus disorder prediction 249 269 - -
Gso11g1628 385 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1628 Gso-Chr11 20117382 20118706 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso11g1628 Ovate 4.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1628 - - gmx:100784032 728.783