Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1616 ATGGCATTCAGCAACAACAAACAAAAGCAACAAGAAGAAGAGGAAGAAGAACACAGAATGGAAGAAGACGAGGACGAAAGCGAAGAAGAAGAGGAACATTTTTGGGACGATTGGGAAGGAGAAGACGAAGAAGGAGAGCAGCGAGACTCTGAATTCGTGTGTCTCTTCTGTGAATCCCGGTACAGCTCGTGCGGTTCCTTGTTCGACCACTGCGCCTCCCTTCACCGCTTTGATTTCCACGCGATTAGAACAACTCTTAGCTTGGATTTCTATGCCTCCTTCAAGCTCATTAACTTCATCCGCTCTCTGGTGGCAGAGAACAGATGTTGGAGTTGTGGATTAACATGCCAGTCCAACCGTGATCTTCAGAATCATTTGCATGATTTAGTTGACTTTAATGAGATAAAGACTTTGTGGAATGATGATAGGTATCTGATACCTTTCATGGAAGATGATTCACTGTTGTACAGTTTTGGTGATTGTGACGAAGAAGGTGAAGATGAACAAATTACTCCAATTGATGAAGATCTTATAAAGGATCTAATGAACATTGAAGAGAGTATCCATGACGATCAAGATGTTGTGAATAAAATGGTAGTTGATGATGACAAACATGAGATTGCTTCTGTCTCTAATGATCATTTGAACAAGGCTAGTTCTTCAAAGGAACTTATTAATGGGAAGGACTTGTGCTGTGATAAGGATCCAGAAGGACATTTGATGGTTAATTCTCAAAATCACATTGCAAAGCATATTAAGAAGATCAATGAAAGTTATTTTGGCTCTTACAGTTCATTTGGTATCCATCGAGAGATGTTAAGTGACAAGGTGAGAATGGATGCTTATGGCCAAGCAATTTTGAAGAATCCGTCTCTACTAAATAGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGAATTCTCAGCCTATTTTCAGCAAAAGCTGGTGCTTCAAGGGTTATTGCAGTCGAGGCTAGTGCCAAGATGGCAGCAGTAGCATCTCAGATTGCAAAAGATAATGGTCTTTTGCTGAGTAAAAGCCAAAATGGAGTTGATGGCTTCCAAAAGGGAGTCATAGAAGTGGTTCATGGTATGGTTGAAGAGATTGATAAAACAGTTGAAGTTCAACCTCACAGTGTTGATGTACTGCTAAGTGAATGGATGGGATATTGCCTGCTGTATGAATCCATGCTTGGTTCAGTACTTTATGCACGAGACCGGTGGTTGAAGCCTGGCGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGCCACAAGTCTTCCTTTTTGGGAAAATGTGTGTGATTTTGACATGTCTTGCATTGGGAAGGAGCTTGTCATAGATGCTGCCCGAATTCCTATAGTTGATGTTGTGGACTCTCAAGATTTAGTTACCTGTTCTGCTATTCTTCAGTCCTTTGACTTGGCAACCATGAAGCCTAATGAAGTGGATTTCACTGCAACTGCTACTTTGGAATTGAAACCAAGTTATTCAGGAACATGCTGCTGGTGTTATGGGGTTGTCCTATGGTTTGATACTGGATTTACAAGCAGATTTTGCCAAGAAACACCAGCTGTGTTATCCACATCCCCTTACATGCCAAGAACACATTGGTCACAGACAATCTTAACCTTTCGAGAACCTATTGCAATGGGATTTGGAAAAGGAAACAGGGGTAAACCAGAAGCAATCGGCACTGAGGTGTATCCTGCTGCGAAGATTGATTTACGTGTCAGCATTGTGCGTTCTACTGAGCATCGCAGCATTGATATATCTTTAGAAGCTGCTGGTGTTGAACCTGATGGTCAGAAACGTAGTTGGCCTGCTCAGCTTTTTAATCTGCAGTAG 1869 0.4184 MAFSNNKQKQQEEEEEEHRMEEDEDESEEEEEHFWDDWEGEDEEGEQRDSEFVCLFCESRYSSCGSLFDHCASLHRFDFHAIRTTLSLDFYASFKLINFIRSLVAENRCWSCGLTCQSNRDLQNHLHDLVDFNEIKTLWNDDRYLIPFMEDDSLLYSFGDCDEEGEDEQITPIDEDLIKDLMNIEESIHDDQDVVNKMVVDDDKHEIASVSNDHLNKASSSKELINGKDLCCDKDPEGHLMVNSQNHIAKHIKKINESYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLNSAVVMDVGCGTGILSLFSAKAGASRVIAVEASAKMAAVASQIAKDNGLLLSKSQNGVDGFQKGVIEVVHGMVEEIDKTVEVQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGATSLPFWENVCDFDMSCIGKELVIDAARIPIVDVVDSQDLVTCSAILQSFDLATMKPNEVDFTATATLELKPSYSGTCCWCYGVVLWFDTGFTSRFCQETPAVLSTSPYMPRTHWSQTILTFREPIAMGFGKGNRGKPEAIGTEVYPAAKIDLRVSIVRSTEHRSIDISLEAAGVEPDGQKRSWPAQLFNLQ* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1616 622 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 262 561 IPR029063 -
Gso11g1616 622 Gene3D Vaccinia Virus protein VP39 248 417 IPR029063 -
Gso11g1616 622 Pfam Methyltransferase domain 298 413 IPR041698 -
Gso11g1616 622 MobiDBLite consensus disorder prediction 16 44 - -
Gso11g1616 622 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 23 621 - -
Gso11g1616 622 Pfam C2H2 type zinc-finger (2 copies) 54 128 IPR041661 -
Gso11g1616 622 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 256 574 IPR025799 GO:0016274|GO:0018216
Gso11g1616 622 CDD AdoMet_MTases 298 416 - -
Gso11g1616 622 Gene3D - 419 617 - -
Gso11g1616 622 SUPERFAMILY beta-beta-alpha zinc fingers 30 171 IPR036236 -
Gso11g1616 622 Coils Coil 4 33 - -
Gso11g1616 622 MobiDBLite consensus disorder prediction 1 44 - -
Gso11g1616 622 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 23 621 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1616 Gso-Chr11 19609278 19615128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1616 27 621 C2H2 Transcription Factor Family AT3G12270 56.661 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1616 K11436 - gmx:100778113 1162.52