Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1612 ATGCTAGATTTAGCAGCTTCCAACGAATCTTTAGGCATCAAAGATCTTGAAGAAGATTTGAAGTTATTTAGCTATACATCAGTTGTGGCAGCGGCAAATGACTTTTCTCTTGAAAACAAGTTAGGAGAAGGAGGCTTTGGACCTGTTTATAAGGGTACCCTACCAACCGGGGAAGAAGTTGCTATAAAAAGACTTTCAAAAGGGTCTGGAAAAGGAATTGTTGAATTTAGAAATGAATTAACCCTCATATGTGAACTCCAACACATGAACCTTGTTCAATTAATTGGTTGTTGCATTCATGAAGAAGAGAGGATTCTAATGTACGAGTATATGCTAAACAAAAGCTTGGATTTCTATATATTTGGTAAGGAATATGCTAAAGTCTATTTAATTATATGTAGCATGCAAGCACATACGCAGGGCTTCAACATAATAGAAGGAAAGTCATTTATGCTTGGTAATGTAGCATAA 471 0.3567 MLDLAASNESLGIKDLEEDLKLFSYTSVVAAANDFSLENKLGEGGFGPVYKGTLPTGEEVAIKRLSKGSGKGIVEFRNELTLICELQHMNLVQLIGCCIHEEERILMYEYMLNKSLDFYIFGKEYAKVYLIICSMQAHTQGFNIIEGKSFMLGNVA* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1612 156 Gene3D Phosphorylase Kinase; domain 1 3 110 - -
Gso11g1612 156 SUPERFAMILY Protein kinase-like (PK-like) 18 129 IPR011009 -
Gso11g1612 156 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 16 149 - -
Gso11g1612 156 Pfam Protein tyrosine and serine/threonine kinase 36 128 IPR001245 GO:0004672|GO:0006468
Gso11g1612 156 ProSiteProfiles Protein kinase domain profile. 35 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1612 156 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1612 Gso-Chr11 19370025 19370786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1612 23 128 Receptor kinase-like Gene Family AT4G04500 56.604 4.06e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso11g1612 PK_Tyr_Ser-Thr 8.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1612 - - gsj:114374038 312.768