Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1597 ATGGGTATGGCTGCAGAAGCTCAGTTCCATGTTCTGGCTGTTGATGATAGCCTTATTGACAGAATGTTGATTGAGAGGCTCCTCAAAACCTCTTCCTTTCATGTTACTGCTGTGGATTCTGGTAGTAAGGCTTTGAAGTTTCTTGGTTTGGTTGAAGAGAAGAGAAATGAGGAGCCTCCTCCCTGTATTGCTCTAGAATCCCATCAGGATGTAGAAGTAAACCTGATCATAACTGATTACTGTATGCCAGAAATGACTGGCTATGATCTGCTGAGAAAGATCAAGGAATCTAAATCTCTTAAAGACATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATTAACAGATGCCTAGAAGAGGGAGCTGATGAATTCTTTCTGAAACCAGTTCAACAGTCAGATGTAAACAAGCTGAGGCCACATTTGATGAAATCAAAAGTTAAGGATGGGGAAGACCAACAAATCAGTAACAAAAGGAAAGAAACAGAAGAAAGCCATTCCCCAGATAAAACTAGGACAAAAATGGAGCCTCAAAAAGTGGTTAATTTCAGTTAA 564 0.406 MGMAAEAQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALKFLGLVEEKRNEEPPPCIALESHQDVEVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPARINRCLEEGADEFFLKPVQQSDVNKLRPHLMKSKVKDGEDQQISNKRKETEESHSPDKTRTKMEPQKVVNFS* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1597 187 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Gso11g1597 187 SMART REC_2 9 142 IPR001789 GO:0000160
Gso11g1597 187 MobiDBLite consensus disorder prediction 142 179 - -
Gso11g1597 187 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 2 183 - -
Gso11g1597 187 MobiDBLite consensus disorder prediction 140 187 - -
Gso11g1597 187 Gene3D - 10 183 - -
Gso11g1597 187 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Gso11g1597 187 CDD REC_typeA_ARR 11 141 - -
Gso11g1597 187 SUPERFAMILY CheY-like 9 139 IPR011006 -
Gso11g1597 187 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 183 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1597 Gso-Chr11 19044090 19046152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1597 1 163 Response Regulator Gene Family AT3G57040 67.683 1.61e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso11g1597 Response_reg 1.6e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1597 K14492 - gmx:100804165 317.005