Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1590 ATGCCGGATGTTCAAGCCCTTGTTAATGATTTTGTGAATCTGCTTAAGAAACGTAGAATTGAAGGGTCTCAAGCCACAGCAAAGCAGACAGCAGTGTTGCTACGCTCGGTGATTTCACAGCAGCGGGTGCCACACACAAACCAGGCCACAGTTCTGATTAATGCAGTAAGGGCGGTGGGGGAGCAAATTATTGATGTTAATCCTATTGAGTTAGCTGTGGGAAATATCGTGAGGCGTGTTTTGCACATTATAAGGGAGGAGGATCTTTCCCTTGTGACAGATGCTGTGGCTGGTTTGGGGATGTTTGCTGGAAGTGATGATGAGGATGATGTTGAGCGAGATGATTATCCTGCTTTATCCGCGGCTTCTGTTGCAGCTGCTGCAAGAAGCACCTCGCGTCCACCGTCATTGCAAACTCTTCTTGAGGATGTGACTGATTCAGCTGTTGTTCCACCAACACCTTCATCGGGCGGTGACTCTGAAGGGATAAGTAGAACTCTTGAAAAAGGTTCAAGTGGTCGGAAGTTTAAGCATGATGTCATTGAAGCAGTCAATGAACTCATCCAAGACATAACCTCTTGCCATGAACAAATAGCAGAGCAGGCAGTAGAACATATTCATCAAAATGAGGTAATATTAACACTAGGTAGTTCAAAAACAGTGTTGGAATTTCTTTGTGCTGCAAAGGAGAAAAAGAGATCATTTAAGGTCGTTGTTGCTGAAGGTGCCCCAAGATATCAGGGACAAGTCCTTGCAAAAGAATTGGCTGCTAGAGGCATACAGACCACAGTAATTGCTGATTCTGCGACTTTTGCTATGATTTCCCAAGTGAATATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAACGGTGGAGTAATTGCCCCGATAGGGTTACATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGGAGTCACAAGTTGTGCCCTTTGTATCCACACAATCCTCAAGTCCTACTGACTGAGCTGAGATCCCCATCTGAGCTTCTTGACTTTGGGGAATTCTCAGATTTGATGGATTCTGCAACTGGTTCTGGTTCTCTTCATGTTGTTAATCCAGCATTTGATTATGTGCCACCAAACCTTGTTAGTCTCTTTATTACTGACACTGGAGGGCATAACCCGTCATATATGTACCGGCTCATAGCTGATTACTACTCCGCTGATGATTTGGTAGTGAAACAAAGACCTACTACAGGGAGTTGA 1248 0.4471 MPDVQALVNDFVNLLKKRRIEGSQATAKQTAVLLRSVISQQRVPHTNQATVLINAVRAVGEQIIDVNPIELAVGNIVRRVLHIIREEDLSLVTDAVAGLGMFAGSDDEDDVERDDYPALSAASVAAAARSTSRPPSLQTLLEDVTDSAVVPPTPSSGGDSEGISRTLEKGSSGRKFKHDVIEAVNELIQDITSCHEQIAEQAVEHIHQNEVILTLGSSKTVLEFLCAAKEKKRSFKVVVAEGAPRYQGQVLAKELAARGIQTTVIADSATFAMISQVNMVIVGAHAVMANGGVIAPIGLHMVALAAQRHAVPFVVLAGSHKLCPLYPHNPQVLLTELRSPSELLDFGEFSDLMDSATGSGSLHVVNPAFDYVPPNLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKQRPTTGS* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1590 415 MobiDBLite consensus disorder prediction 133 167 - -
Gso11g1590 415 Pfam Initiation factor 2 subunit family 20 389 IPR000649 GO:0044237
Gso11g1590 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 55 407 - -
Gso11g1590 415 MobiDBLite consensus disorder prediction 133 171 - -
Gso11g1590 415 Gene3D - 194 399 IPR042529 -
Gso11g1590 415 PANTHER BNAA01G32370D PROTEIN 55 407 - -
Gso11g1590 415 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 404 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1590 Gso-Chr11 18846056 18852978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1590 1 407 Eukaryotic Initiation Factors Gene Family AT3G07300 77.017 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1590 K03754 - gmx:100807877 778.859