Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1568 ATGTTAATAATGGTCCGATTTTTCTTCTTCTGCTTCTTCATTTCCACGTTATTAATACAAGGCACCCTCGCTATAATTACTCCAAATGAGTCAATCCAAGGCAATAGGACCCTAGTTTCTTCTGCTGGAACTTTTGAAGCAGGATTCTTCAACTTTGGAAATTCACAAGGCCAATACTTTGGTATATGGTACAAGAACATATCACCAAAGACTATTGTGTGGGTTGCCAACAAAGATGCCCCAGTTAAAGACTCAACAGCATTTCTCACACTAACACATCAAGGAGATCCTGTTATTCTTGATGGCTCAAGGAGTACTACTGTGTGGTTCTCCAATTCATCAAGAATTGCTGAGAAACCAATTATGCAGCTTCTAGACTCGGGAAATCTTGTTGTGAAAGATGGAAACAGCAAAAAAGAGAATTTTTTGTGGGAAAGTTTTGATTACCCTGGTAACACTTTTCTTGCAGGAATGAAACTTAGGACAAACTTAGTTTCTGGTCCTTATAGGTCTCTCACATCTTGGAAAAACGCAGAAGATCCCGGTTCTGGTGAGTTTTCATATCACATAGATGCTCATGGATTTCCTCAACTGGTTACTACAAAGGGAGAAATTTTATTTAGCAGAGCAGGGTCATGGACTGGCTTTGTTTTCAGTGGAGTTTCTTGGCGAAGAATGCTTAGCCTTGTAACTTTTTCGCTAGCGATTAATGACAAGGAAGTCACTTACCAATATGAAACCCTGAAGGCTGGAACTGTTACTATGTTAGTGATCAATCCATCAGGCTTTGTGCAACGTTTGTTATGGTCCGAACGGACTGGGAATTGGGAGATTTTATCAACTCGTCCCATGGATCAGTGTGAATACTATGCCTTTTGTGATGTGAATTCTTTGTGTAATGTTACTAACTCTCCAAAAACATGTACATGCTTGGAAGGTTTTGTACCCAAGTTTTATGAGAAATGGAGTGCATTAGATTGGTCTGGTGGGTGTGTTAGAAGAATAAACTTGAGTTGTGAAGGTGATGTGTTTCAAAAGTACGCAGGAATGAAATTGCCAGATACTTCTTCTTCTTGGTATGACAAGAGTTTGAACCTTGAGAAATGTGAGAAATTGTGTTTGAAAAACTGCTCTTGTACAGCATATGCAAATGTAGATGTTGATGGGAGAGGGTGTTTGCTTTGGTTTGATAACATTGTGGATTTGACAAGACACACAGACCAAGGACAAGATATTTACATACGGCTTGCAGCTTCAGAGTTAGATCATAGAGGGAATGACCAGAGCTTTGATAACAAGAAGCTTGTAGGGATAGTAGTAGGCATTGTTGCATTCATCATGGTACTTGGATCGGTCACATTCACATATATGAAGAGAAAGAAGCTCGCAAAGAGAGAGATGCTAAAAATATTTCACTGGAAATACAAAAGGGAGAAGGAAGATGTGGAGTTATCAACAATATTTGATTTTTCAACCATCTCTAATGCTACAGATCAATTTTCACCCAGTAAAAAGTTAGGAGAAGGTGGCTTTGGACCAGTATACAAGGGTTTATTGAAAGATGGACAAGAGATTGCAGTCAAGAGGCTTGCAAAAACTTCTGAGCAAGGAGCAGAGCAGTTCAAAAATGAAGTCATGTTGATGGCAAAACTTCAGCACCGCAATCTTGTAAAACTTCTTGGATGTTCTATTCACCAAAAAGAAAGGCTCTTGATCTATGAATACATGTCCAACAGAAGCTTGGATTACTTCATTTTTGATTCAACACAAAGTAAACAACTAGATCTGACAAAGCGCCTTCAAATCATCGATGGTATTGCTCGAGGGCTACTCTATCTTCATCAAGACTCTAGATTAAGAATCATCCACAGAGATCTCAAAGTTAGCAACATTCTTCTAGATAATGATATGAATCCAAAGATATCAGATTTTGGTTTGGCTAGAACATTTGGAGGAGATCAAGCTGAGGCTAATACAAATAGAGTGATGGGAACATATGGTTATATGCCTCCTGAATATGCACTTCATGGACATTTTTCAATCAAATCTGATGTATTTAGCTTTGGTGTAATTGTGCTGGAGATAATAAGTGGGAGAAAGAATCGGAATTTCCAAGACTCTGAGCATCATCTTAATCTTCTTAGTCATGCATGGAGACTGTGGATTGAAGAAAAGCCACTTGAGCTAATAGATGACCTATTAGATGATCCAGTCTCTCCACATGAAATACTCAGATGTATTCATGTGGGTCTGCTATGTGTGCAACAAACACCTGAAAATAGACCCAACATGTCATCTGTGGTTTTAATGTTGAATGGTGAAAAGTTGTTGCCTGATCCAAGCCAACCTGGGTTCTACACAGGAACAATTCAGTATCCAATTCAGCTAGAATCTTCTTCGAGAAGTGTTGGAGCATGTTCACAAAATGAAGCTACAGTGTCCTTGTTAGAGGCACGATAG 2460 0.3894 MLIMVRFFFFCFFISTLLIQGTLAIITPNESIQGNRTLVSSAGTFEAGFFNFGNSQGQYFGIWYKNISPKTIVWVANKDAPVKDSTAFLTLTHQGDPVILDGSRSTTVWFSNSSRIAEKPIMQLLDSGNLVVKDGNSKKENFLWESFDYPGNTFLAGMKLRTNLVSGPYRSLTSWKNAEDPGSGEFSYHIDAHGFPQLVTTKGEILFSRAGSWTGFVFSGVSWRRMLSLVTFSLAINDKEVTYQYETLKAGTVTMLVINPSGFVQRLLWSERTGNWEILSTRPMDQCEYYAFCDVNSLCNVTNSPKTCTCLEGFVPKFYEKWSALDWSGGCVRRINLSCEGDVFQKYAGMKLPDTSSSWYDKSLNLEKCEKLCLKNCSCTAYANVDVDGRGCLLWFDNIVDLTRHTDQGQDIYIRLAASELDHRGNDQSFDNKKLVGIVVGIVAFIMVLGSVTFTYMKRKKLAKREMLKIFHWKYKREKEDVELSTIFDFSTISNATDQFSPSKKLGEGGFGPVYKGLLKDGQEIAVKRLAKTSEQGAEQFKNEVMLMAKLQHRNLVKLLGCSIHQKERLLIYEYMSNRSLDYFIFDSTQSKQLDLTKRLQIIDGIARGLLYLHQDSRLRIIHRDLKVSNILLDNDMNPKISDFGLARTFGGDQAEANTNRVMGTYGYMPPEYALHGHFSIKSDVFSFGVIVLEIISGRKNRNFQDSEHHLNLLSHAWRLWIEEKPLELIDDLLDDPVSPHEILRCIHVGLLCVQQTPENRPNMSSVVLMLNGEKLLPDPSQPGFYTGTIQYPIQLESSSRSVGACSQNEATVSLLEAR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1568 819 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Gso11g1568 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Gso11g1568 819 ProSiteProfiles Protein kinase domain profile. 500 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1568 819 Gene3D Hepatocyte Growth Factor 337 418 - -
Gso11g1568 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 181 IPR036426 -
Gso11g1568 819 Pfam D-mannose binding lectin 71 176 IPR001480 -
Gso11g1568 819 SMART serkin_6 500 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1568 819 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 18 818 - -
Gso11g1568 819 Gene3D Phosphorylase Kinase; domain 1 473 575 - -
Gso11g1568 819 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Gso11g1568 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Gso11g1568 819 Gene3D Transferase(Phosphotransferase) domain 1 576 777 - -
Gso11g1568 819 Pfam Protein tyrosine and serine/threonine kinase 503 768 IPR001245 GO:0004672|GO:0006468
Gso11g1568 819 SMART blect_4 29 150 IPR001480 -
Gso11g1568 819 Gene3D - 19 147 IPR036426 -
Gso11g1568 819 CDD B_lectin 29 150 IPR001480 -
Gso11g1568 819 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 818 - -
Gso11g1568 819 CDD PAN_AP_plant 336 417 - -
Gso11g1568 819 Pfam PAN-like domain 339 402 IPR003609 -
Gso11g1568 819 SMART ntp_6 339 416 IPR003609 -
Gso11g1568 819 ProSiteProfiles PAN/Apple domain profile. 339 417 IPR003609 -
Gso11g1568 819 SUPERFAMILY Protein kinase-like (PK-like) 485 789 IPR011009 -
Gso11g1568 819 CDD STKc_IRAK 506 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1568 Gso-Chr11 18467091 18471779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1568 435 799 Receptor kinase-like Gene Family AT4G23190 51.200 9.08e-126 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso11g1568 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1568 - - gmx:100803275 1640.55