Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1558 ATGCAAAAGTTCAAGGGTCATTACAAACAAGTGGTATCATTGAAGAAAAGTGGTTGCATGAATAATGATGTCATGCTTCATGCTTCATGCTTCATGCTTCATGCATATGCCATTTGGAAGGAAGACGAAGGAAGACATTTTGGTTTGGAGCATGGTTGGCGACTACTAAAAGATCAATCGAAATGGTTAGACCACTTTACTGACAATGGCTTTAAAAGGATGAAGATTTTCGCATATGGGGCGTATTCATTGTTATCTAATCCAGAAACACCGGTAGAAGATTTTGAAGCTGGCACACAATCTCGAATTGTTCGTCCAATGGGTCAAAAGGCAACCAAAAGGAAGAGCAAGGGGAAAGGAGTAGGAACATCTATCAATCCCATGGACTTGACTGGTGTGGAGGAAGTAATGAGGGAAATAAATGTTTTCAATGCCAGACTAGCAGACTTAAGGGAGAAAGAATTGGAAAAGGAGTACTACGACATTCTAATGAAGGACACATCTACAATGTCCGAAAGTCAACTCTAA 528 0.4015 MQKFKGHYKQVVSLKKSGCMNNDVMLHASCFMLHAYAIWKEDEGRHFGLEHGWRLLKDQSKWLDHFTDNGFKRMKIFAYGAYSLLSNPETPVEDFEAGTQSRIVRPMGQKATKRKSKGKGVGTSINPMDLTGVEEVMREINVFNARLADLREKELEKEYYDILMKDTSTMSESQL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1558 175 PANTHER OS07G0575233 PROTEIN 2 167 - -
Gso11g1558 175 Pfam No apical meristem-associated C-terminal domain 45 174 IPR029466 -
Gso11g1558 175 PANTHER - 2 167 - -
Gso11g1558 175 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1558 Gso-Chr11 18288373 18288900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1558 3 123 Glutathione S-transferase Gene Family AT5G41240 32.283 6.23e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1558 - - gmx:102663132 242.662