Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1557 ATGGTTCAAAGAAAAGTGCCTAGCAAGCTTGGTATCCAAGCTGAACATGTTAAATCAGACAAGAGGTTGTCAAACCTGAAGCTACTATCTTCATCTCATCACCAAGATGGAAAAAATAGAGGGGCTGATATGAAGAAGAAAATGAAAAAATCAAGGTCAATAAAGCTTTCCGATCTTGAGGCTCTTCAATCATCATCATCATCATCACCTTCAAGGAGAAGCTTGTCTCTTCACACTCCAACAACTACAACATCAGCATCACCACAGAAGCAACAACCTTTGTTCAGAACTGTTGATGGTTCACCAAATTACATGAAGCCAACAAGCAGTTCACATGCAAAAAAGGAGCTTTTCCTGGTAAGCCAAAGGAACACTCAACCTGGTTCTGATTTTAAGAATCTTCCTAGAAAAATTTCCAGTGATTCCAAAGCTGCATGTGTTAAGAAACCTGCAAAAGCCTTGACAAGAACATCTAATAGTTTGAGTTTGGTGAGAACATTGACCAAAACCACTAGTTTCAAGGCTTCTAGAGCTTGTTCTAGAAAATCCACCAGGGCTGTTATGTGTTCTGCACCACAGAGAGCTACATGTTCTTCAACTTTGAAGGACTCAAAGTTCCCTGCATACCTCATGCTTAGCTCTGGGGGAACTCAGTCAGAGGGAACTTCAGCCATGAAGGTTTGCCCTTACACATATTGTTCTCTTAATGGTCATCACCATGCTGATTTGCCACCGTTGAAGAGCTTCGTGTCCGCGAGAAGACACCTTTTGAAGACGCAGAAGCGTGTGAAGCTTGAAGCTCTCAGCCCTCGGAGACTGAAGGTTCCTCTTGAGACACAGAAGGAGGACTCTGATGTTGAGCCGAATGTCTTTGATGCAAAACCTGCTTGTGATGAAATTGGCATTGATATTTTCATTGAAATCTATGCCAATGAAAAGGATGCAAAACCAACAGCAGCAGAAGGAATGGGGAGAATAAATTTTCTCAAAGAGATTGAGGATCATGAAGATAATAGCAAGTCAACAATTGAGGATAATTGCATAGCAGCAAGTGAGGAGGGTGTCATGCAAATCACTACTCCAAGAAGTATTGGTAATTGTATTCCTTCTCCCTCTATATCTGAGATTGATCTTGAGGAGGATTTGAAAAAATCCTTAGATGATGCTGAAATTGGAATAGATGCCACCAAAGAAAGATTTCTCCAAGAACAAAAAGAAGGAGATTCAGATGAAGATCACCAATCTATTGTCTGGTCTCATGAAGAAATGAGCATTGGAAGTTACTGCAGTGATGGGGAACAAGACATAGCGGATGTTGACATGTATAATTCTGATTCCAAAACCTATGACATGGAGTGGGAGGAGGAGCGGTTGCACGAATTCGAACAAGATGAGGATGCTGATTCTTCTGTGTACACAGAGGAGGACAACTCAAAAGTTGAGTCCTCATCAGGGAGTTCTCATGATGTATCAGTGACATGGTTAGATGATATCCTTGGTGGCTATTATGAGGACTTTCTTGTTGATGAAACACACAAAGAAGCAAATTCAGAAGAAAGAACCTACTTTGAAGAACAACCTAGTGGCACTAGTTCTTCTGTCCTTGAAGACACAAATGGAAGCACTGAAACTCAAGAAAACCTGACAAATACACAAGATAATGGTGGAGAAGATGAAAAACATAAGGATGATGATGAGGCCAGTTGCAACACAAAGCCACTTGATGAAGAGACAATTGACAACACTCAATGTCAGAAGATGAGTGGAACTTGCAAAATTGAAGAGACAAATGAAAATGGATACTCAATCAGTCTAGAGAACAATGATGAGAGCAACAAAGGGGAGAGCCAAATTGAGTTGGAGGATGTGTCTGAAAAAGAAAGTAACATAGCTTCTCAAGATCAAGATTTGTTGGACAAAGACCAAGGCAAAGCTAAAAGGTTCCAGCAAAACACAAGTTGCATAGATGGTAAAGAGGAAAACACATGCAAAAATTGGAAAGATGGTATTAGGAGAAAGAAGGGTGTTGAAGATGATGATGATGAAATGAGAAAGTTCAACCCAAAAGAGCCAAATTTTCTGCCATTGGTTCCTGAGCCAGGACAAAAGAAGGTTGACCTGAGGCATCAAATGATGGATGAGAGAAAGAACTCAGAGGATTGGATGCTTGATTGTGCACTAAGACAAGTTGTGACAAAGCTTGCACCAGCTAGGAAGAAGAAAGTGGCACTTCTAGTTGAAGCCTTTGAAATGGTATTGCCAGCAGCAGCACCAAAATGTGAAACCAGTGTGAGAAACAACAATTCTTCAGCATTTGGTCATTCAGGAAGAATTCAAGCTTGTAGCTGA 2349 0.4078 MVQRKVPSKLGIQAEHVKSDKRLSNLKLLSSSHHQDGKNRGADMKKKMKKSRSIKLSDLEALQSSSSSSPSRRSLSLHTPTTTTSASPQKQQPLFRTVDGSPNYMKPTSSSHAKKELFLVSQRNTQPGSDFKNLPRKISSDSKAACVKKPAKALTRTSNSLSLVRTLTKTTSFKASRACSRKSTRAVMCSAPQRATCSSTLKDSKFPAYLMLSSGGTQSEGTSAMKVCPYTYCSLNGHHHADLPPLKSFVSARRHLLKTQKRVKLEALSPRRLKVPLETQKEDSDVEPNVFDAKPACDEIGIDIFIEIYANEKDAKPTAAEGMGRINFLKEIEDHEDNSKSTIEDNCIAASEEGVMQITTPRSIGNCIPSPSISEIDLEEDLKKSLDDAEIGIDATKERFLQEQKEGDSDEDHQSIVWSHEEMSIGSYCSDGEQDIADVDMYNSDSKTYDMEWEEERLHEFEQDEDADSSVYTEEDNSKVESSSGSSHDVSVTWLDDILGGYYEDFLVDETHKEANSEERTYFEEQPSGTSSSVLEDTNGSTETQENLTNTQDNGGEDEKHKDDDEASCNTKPLDEETIDNTQCQKMSGTCKIEETNENGYSISLENNDESNKGESQIELEDVSEKESNIASQDQDLLDKDQGKAKRFQQNTSCIDGKEENTCKNWKDGIRRKKGVEDDDDEMRKFNPKEPNFLPLVPEPGQKKVDLRHQMMDERKNSEDWMLDCALRQVVTKLAPARKKKVALLVEAFEMVLPAAAPKCETSVRNNNSSAFGHSGRIQACS* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1557 782 MobiDBLite consensus disorder prediction 476 491 - -
Gso11g1557 782 MobiDBLite consensus disorder prediction 574 611 - -
Gso11g1557 782 SMART CaM_binding_2 642 754 IPR012417 GO:0005516
Gso11g1557 782 MobiDBLite consensus disorder prediction 612 645 - -
Gso11g1557 782 Pfam Plant calmodulin-binding domain 646 754 IPR012417 GO:0005516
Gso11g1557 782 MobiDBLite consensus disorder prediction 459 491 - -
Gso11g1557 782 MobiDBLite consensus disorder prediction 1 115 - -
Gso11g1557 782 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 543 - -
Gso11g1557 782 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 543 782 - -
Gso11g1557 782 MobiDBLite consensus disorder prediction 514 645 - -
Gso11g1557 782 MobiDBLite consensus disorder prediction 57 115 - -
Gso11g1557 782 MobiDBLite consensus disorder prediction 522 552 - -
Gso11g1557 782 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 543 IPR044681 GO:0005516
Gso11g1557 782 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 543 782 IPR044681 GO:0005516
Gso11g1557 782 MobiDBLite consensus disorder prediction 553 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1557 Gso-Chr11 18278503 18282751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1557 670 754 Calmodulin-binding Proteins AT2G38800 62.353 3.47e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1557 - - gmx:102666498 1484.93