Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1554 ATGGGTTCTAACTATGAAGAGATTCTTCCTCTTCCAAAATGTTCACCTCATGATGAAGACAATGCATGCCTATCTGCTATGCAACTTAGCTTTAGCCCAATGGTTTATACTGCTGTGTTGAATGCTGCTATTGAGCTCAACTTGTTTGAGATCATAGCAAAGGCAAACCCACCAGGCATGTCAGCCTCTGAGGTTGCTTCTAAACTTCCAACTCAGCACAAAAATTTACCTAAAAGGCTTGATCGCATGCTGTGTCTACTTGCCAGTCATTCTCTTCTTACCTGTTCTACAAGCACAAAGGAAGATGGTGGGGTTGAAAGACTCTATGAACTTTCACCTGTTGGCAAGTACTTTGTCAATGATGAAACCACTGGCTCTTTGGCCTTGTTTTCAACGTTTATGAATCATGGAACGCTCGTTGACGCATTCCTTAATTTCAAGGAGATACTTCTTGACTGTGATAATGGCCTATACATTAAAGTTCATGGAATGCCCATTTATCAAGGCATACAATCTGATCCAGCGTGGGATCATACTTTTAATAAAGCAATGGCCAATATATGCACAAGAGAGATGACAAAGATACTTGAAATATATACTGGATTCGAAGGAATATCATTGTTAATTGATGTGGGAGGTGGAGTTGGGCAGTGCTTGAATATGATAATCTACAAGTATCCTTCAATAAAGGGTGTTAATTTTGATCTTCCACAAGTAATACAACAAGCTCCAACTTATCCAGGGATTGAGCATTTTGAAGGAGATATGTTCGAAAGTGTTCCAAAGGGTGATGCCATACTATTGAAGGGCATATTGCACAATTGGTCCGATGAAAATTGTTTGAAAATTCTAAATAATTGCTACAAAGCTTTGCCAGAAAACGGTAAGTTGGTTGTTGTAGACTTCATAATGCCCGAAGCAGTTCAGTCTACTGAAGCAGATAAGATGGTTACTAGCTTTGACAATCTTATGTTTCTTGACGGAGGAAGCGAAAGAACCGAGAAAGAATTTTTGAATTTATGCAAATGTTCTGATTTTTCTAGTTTCCAAGTTGTTTGTCGTGCCTTTACTGCTTTGGGAGTGATGGAATTTTATAAATAA 1101 0.386 MGSNYEEILPLPKCSPHDEDNACLSAMQLSFSPMVYTAVLNAAIELNLFEIIAKANPPGMSASEVASKLPTQHKNLPKRLDRMLCLLASHSLLTCSTSTKEDGGVERLYELSPVGKYFVNDETTGSLALFSTFMNHGTLVDAFLNFKEILLDCDNGLYIKVHGMPIYQGIQSDPAWDHTFNKAMANICTREMTKILEIYTGFEGISLLIDVGGGVGQCLNMIIYKYPSIKGVNFDLPQVIQQAPTYPGIEHFEGDMFESVPKGDAILLKGILHNWSDENCLKILNNCYKALPENGKLVVVDFIMPEAVQSTEADKMVTSFDNLMFLDGGSERTEKEFLNLCKCSDFSSFQVVCRAFTALGVMEFYK* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1554 366 CDD AdoMet_MTases 208 304 - -
Gso11g1554 366 Gene3D Vaccinia Virus protein VP39 177 355 IPR029063 -
Gso11g1554 366 PANTHER O-METHYLTRANSFERASE 1 366 IPR016461 GO:0008168
Gso11g1554 366 PIRSF O-mtase 10 366 IPR016461 GO:0008168
Gso11g1554 366 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 366 - -
Gso11g1554 366 Pfam O-methyltransferase domain 149 346 IPR001077 GO:0008171
Gso11g1554 366 SUPERFAMILY "Winged helix" DNA-binding domain 19 122 IPR036390 -
Gso11g1554 366 Pfam Dimerisation domain 39 88 IPR012967 GO:0046983
Gso11g1554 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 366 IPR016461 GO:0008168
Gso11g1554 366 Gene3D - 35 195 IPR036388 -
Gso11g1554 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 358 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1554 Gso-Chr11 18212513 18215988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1554 1 366 Monolignol Biosynthesis Gene Families AT5G54160 46.341 4.19e-105 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1554 - - gmx:100784030 747.273