Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1547 ATGGACTCAGGTTCGCCATATCAGTGGCTGAGGGAGCTGAGATGGGAGTCACAGGGCTTAAATCCAATGATCCTTCTTCTTGACTGTGCTAAATGTGTTGCATCTGGAAGCATCAAGAATGCAGATATTGGCCTTGAGTACATATCTCAGATTTCATCACCTGATGGTAGTGCAGTGCAAAGGATGGTCACTTATTTCAGCGAAGCACTTAGTTACAGGATAATAAAACGTTTGCCAGGTGTATATAAGTCTCTCAATCCACCAAAAACATCACTGTCTTCAGAAGACATCCTTGTTCAGAAATACTTCTATGATCTGTGTCCTTTTTTAAAGTTCTCATACCTGATCACAAACCAAGCCATTGTGGAGGCGATGGAATTCGAAAAGGTGGTTCACATTATTGATCTCCACTGTTGTGAGCCAGCTCAATGGATAGATCTTCTACTAACTTTCAAAAACCGTCAGGGAGGTCCACCTCATCTCAAAATTACAGGCATTCATGAGAAGAAAGAGGTTTTAGACCAAATGAACTTTCATTTGACAACTGAAGCAGGGAAATTGGATTTTCCTTTGCAGTTCTATCCAGTTATTAGCAAACTGGAAGATGTTGACTTTGAGAAGTTGCCTGTGAAGATAGGAGATGCTCTTGCAATCAGTTCTGTTCTTCAGCTTCATTCTCTTCTTGCCACTGATGATGACATGGCGGGGAGGATCTCACCGGCTGCGGCCGCGACTATGAATCTGCAGAGAGCAGTGCATATGGGCCAAAGGACTTTTGCAGAGTGGCTTGAGAGAGATATGATCAATGCATATATCTTGAGTCCTGATTCTGCATTGTCACCTCTTTCCTTAGGTGCCTCACCTAAGATGGGGATCTTTCTCAACGCTATGCAAAAACTCCAACCAAAACTGGTGGTGATTACTGAACAAGAATCAAACCTGAATGGATCCAATTTGATGGAGAGAGTTGATAGAGCACTGTACTTTTACAGTGCATTGTTTGACTGCTTGGAATCTACTGTTTTGAGAACATCAGTAGAGAGACAAAAACTTGAGAGCATGCTTCTGGGTGAGCAGATTAAGAACATCATTGCTTGTGAGGGTGTTGATAGAAAGGAGAGACACGAGAAACTCGAGAAATGGATTCGAAGGCTTGAAATGGCTGGTTTTGTGAAGGTACCTTTGAGCTACAATGGGAGGATAGAAGCCAAGAATCTGCTGCAGAGATATAGTAATAAATACAAATTTCGAGAAGAGAATGATTGTTTACTTGTCTGCTGGAGTGATACACCAATGTTTTCTGTATCAGCTTGGAGTTTTAGTAGATGA 1329 0.4191 MDSGSPYQWLRELRWESQGLNPMILLLDCAKCVASGSIKNADIGLEYISQISSPDGSAVQRMVTYFSEALSYRIIKRLPGVYKSLNPPKTSLSSEDILVQKYFYDLCPFLKFSYLITNQAIVEAMEFEKVVHIIDLHCCEPAQWIDLLLTFKNRQGGPPHLKITGIHEKKEVLDQMNFHLTTEAGKLDFPLQFYPVISKLEDVDFEKLPVKIGDALAISSVLQLHSLLATDDDMAGRISPAAAATMNLQRAVHMGQRTFAEWLERDMINAYILSPDSALSPLSLGASPKMGIFLNAMQKLQPKLVVITEQESNLNGSNLMERVDRALYFYSALFDCLESTVLRTSVERQKLESMLLGEQIKNIIACEGVDRKERHEKLEKWIRRLEMAGFVKVPLSYNGRIEAKNLLQRYSNKYKFREENDCLLVCWSDTPMFSVSAWSFSR* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1547 442 ProSiteProfiles GRAS family profile. 13 439 IPR005202 -
Gso11g1547 442 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 440 IPR005202 -
Gso11g1547 442 Pfam GRAS domain family 25 438 IPR005202 -
Gso11g1547 442 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 4 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1547 Gso-Chr11 18116286 18119562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1547 1 438 GRAS Transcription Factor Family AT1G50420 51.230 5.13e-153 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso11g1547 GRAS 2.3e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1547 - - gmx:100779726 875.159