Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1541 ATGGTTAAGAAGGGTTGGTTTAGCATGTTTAAGAAGCTCTTTTTATGGAACACACATTCCTCACAAGAGAAGAAGGAGAAAAGAAGAAGGGCTTGGATATTTGGGAGGGTTAAGACCAAGAGATTGCCTTCAATTACAGCTCCACCACCACCACCTTCAAAAGAAACAAGACTAAGTGAGGCTGAGGAAGAACACAGCAAGCATGCTTTGACAGTGGCCATTGCTTCAGCTGCTGCTGCTGAAGCTGCTATTACTGCAGCTCAGGTTGCTGTTGAGGTTGTTAGGCTCCAATCTGCTGCTCATCTACAACTTAAAGAAAAACAAGAACAACTTCAATTACAACCTTTTAAAACTAGCCATGATGCTCCTCAGAATACACACCAACGCCAGAGGAAGATTCAAGAATCTTCAGCCATCAAAATTCAAACAGCATATAGAGGTTACCTAGCAAGGAAAGCTTTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGAAGAGCTGTGAGACGCCAAGCTTTGAGTACTCTAAAGTGCTTAGAGTCAATAGTAAGTATCCAATCACAGGTCTTCGCAAGGAAATCCCAAATGGTTGAAGAAAGATGGGATTGTGGTGAACATGAAGAGATGCAAGGTTCAAGAGACAAGATAATAAGGATGGACTCAAACAGTGAGAGAACGTGGGATGACAGCATTTTGTTGAAGGAAGAGGTAGATGCCTCTTGCGTAAGCAAGAAAGAAGCAGTTCTTAAGAGAGAAAAAGTAAAAGAATACTCATTTAACCACAGAAGGTCAGCTGAATCAGAAAGAAATAAAATAAATGGAAGATGGAGGTACTGGATGGAGCAGTGGGTAGACACACAACTTTCTAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCACATTATTCTAGACCTGGGGAGGAATGTGGAAGGAGACAACTAAAGCTTAGAAATTTTCAGAGACAAAACCAGATTGAAGCATTAGATTCTCCATCACTTTCTTCAAGGAACCAAACTTCAGGGGCAGAAGATCACTCAGTTCCAAGCTCTCCTGCAATTCCTACATACATGGCTGCAACAAAATCAACACAAGCAAAAGCAAGATCAACAAGCTCCCCAAGAGCAAGGATAGGAGGGAATTTTGACATCAACTCTGATAGCTATTCACCATGCAAGAATAAGTTACCTATTGTGACTTCTATTAATGGTGAAGTGCTTAGTAATGGTAGGATTGGCAAGCTCAGCAGTAATCAGCAAAGATCACCTAGCTTAAAGGGCCTTCCAAGACCTCTAAAATTAAGTCAAACATTGAGGGGTCTTAGCATTAATTCAGATTGCCCAGTGCCAATTTGA 1374 0.4112 MVKKGWFSMFKKLFLWNTHSSQEKKEKRRRAWIFGRVKTKRLPSITAPPPPPSKETRLSEAEEEHSKHALTVAIASAAAAEAAITAAQVAVEVVRLQSAAHLQLKEKQEQLQLQPFKTSHDAPQNTHQRQRKIQESSAIKIQTAYRGYLARKALRALKGIVKLQAIIRGRAVRRQALSTLKCLESIVSIQSQVFARKSQMVEERWDCGEHEEMQGSRDKIIRMDSNSERTWDDSILLKEEVDASCVSKKEAVLKREKVKEYSFNHRRSAESERNKINGRWRYWMEQWVDTQLSKSKELEDLDSVFSSHYSRPGEECGRRQLKLRNFQRQNQIEALDSPSLSSRNQTSGAEDHSVPSSPAIPTYMAATKSTQAKARSTSSPRARIGGNFDINSDSYSPCKNKLPIVTSINGEVLSNGRIGKLSSNQQRSPSLKGLPRPLKLSQTLRGLSINSDCPVPI* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1541 457 PANTHER IQ-DOMAIN 5-RELATED 1 451 - -
Gso11g1541 457 ProSiteProfiles IQ motif profile. 158 185 IPR000048 GO:0005515
Gso11g1541 457 MobiDBLite consensus disorder prediction 333 360 - -
Gso11g1541 457 Pfam Protein of unknown function (DUF4005) 338 430 IPR025064 -
Gso11g1541 457 Gene3D - 134 185 - -
Gso11g1541 457 MobiDBLite consensus disorder prediction 333 353 - -
Gso11g1541 457 Pfam IQ calmodulin-binding motif 136 155 IPR000048 GO:0005515
Gso11g1541 457 MobiDBLite consensus disorder prediction 366 385 - -
Gso11g1541 457 MobiDBLite consensus disorder prediction 41 63 - -
Gso11g1541 457 SMART iq_5 133 155 IPR000048 GO:0005515
Gso11g1541 457 ProSiteProfiles IQ motif profile. 134 162 IPR000048 GO:0005515
Gso11g1541 457 PANTHER IQ-DOMAIN 11 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1541 Gso-Chr11 17977481 17980685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1541 3 456 IQD Protein Family AT5G13460 43.432 1.12e-98 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1541 - - gmx:100777067 852.818