Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1522 ATGCTCAATAAGACTCTCTCTTTTGCCATGGGGTGCTGTAGTTGCTTCGGGTTCATCAGGACACCTAACCGTCAAAGTCAAAGGTCTAAGCCTGCCACTAACAATAATAATCTCTGCCAGGAGCCTCTTCTAGATGATGACATTGAAGATGAAGAGGGTGAGCATTTGTACAATGATGAGGTTACTAACACTAGTGGAGATGAAGGCGAGGAGGAAACTCGTCCCAAGCGATCGGAAGAAATTTTGAACTTGAGAGTAGAAAATGACATGATTTGTACACGGTTTCCTGTTAAGGAGACTCACAAACTTGTGCGCACCGAGGATGAAAATGGGAACAAGATGATAAATGAGTATATTCGTGAGTGTAAAATTGGTTCTGGTAGCTATGGGAAAGTGGCTCTTTATCAAAGCTCTGTCGATGGAAAGAATTATGCAATTAAGGCCTTTCATAAATCTCATTTACTGAAGCTTCGAGTTTCACCCTCAGAAACTGCCATGACTGACGTACTACGCGAGGTTCTCATTATGAAAATGCTGGAACATCCTAATATAGTCGATCTCATTGAGGTGATTGATGACCCACAGTCAGATAACTTCTACATGGTACTTGAATATGTGGAAGGAAAATGGATATGCGAGGGTTCAGGTACCACTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATACTTGCGTGATATAGTTTCTGGATTAACATATCTCCATGCTCATAATATTGTTCATCTGGATATTAAGCCAGATAATCTGTTGATTACTCGTCATGGTACAGTAAAGATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGATAAAGATGAGCTTCGTCGATCACCTGGCACTCCTGTTTTCACTGCACCAGAGTGTATTTTAGGTGTGAAATATGGTGGTAAAGCTGCAGACACGTGGGCAGTAGGAGTTACTTTATACTGTATGATATTGGGTGAATACCCTTTTCTTGGAGACACACTTCAAGATACATATGACAAAATAGTCAATAATCCTTTAGTACTCCCCAACGATATGAATCCCCCATTGAAGAACTTAATAGAAGGCCTACTTTCCAAAGACCCAAGATTAAGGATGTCTTTAAGTGATGTTGCGGAAGATAGCTGGGTTATTGGAGATGATGGGCCAATTCCTGATTACCTTTGTTGGTGCAAAATGAAGAGCTTGGGAATTGAGGACAATGATGAGAGCAATACTGACTAA 1230 0.413 MLNKTLSFAMGCCSCFGFIRTPNRQSQRSKPATNNNNLCQEPLLDDDIEDEEGEHLYNDEVTNTSGDEGEEETRPKRSEEILNLRVENDMICTRFPVKETHKLVRTEDENGNKMINEYIRECKIGSGSYGKVALYQSSVDGKNYAIKAFHKSHLLKLRVSPSETAMTDVLREVLIMKMLEHPNIVDLIEVIDDPQSDNFYMVLEYVEGKWICEGSGTTCGLGEETARRYLRDIVSGLTYLHAHNIVHLDIKPDNLLITRHGTVKIGDFSVSQAFEDDKDELRRSPGTPVFTAPECILGVKYGGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPNDMNPPLKNLIEGLLSKDPRLRMSLSDVAEDSWVIGDDGPIPDYLCWCKMKSLGIEDNDESNTD* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1522 409 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 409 - -
Gso11g1522 409 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Gso11g1522 409 MobiDBLite consensus disorder prediction 57 77 - -
Gso11g1522 409 SMART serkin_6 118 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1522 409 SUPERFAMILY Protein kinase-like (PK-like) 108 386 IPR011009 -
Gso11g1522 409 Gene3D Phosphorylase Kinase; domain 1 112 215 - -
Gso11g1522 409 Gene3D Transferase(Phosphotransferase) domain 1 217 385 - -
Gso11g1522 409 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 409 - -
Gso11g1522 409 CDD STKc_LKB1_CaMKK 124 379 - -
Gso11g1522 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Gso11g1522 409 Pfam Protein kinase domain 120 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1522 409 ProSiteProfiles Protein kinase domain profile. 118 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1522 Gso-Chr11 17722239 17728205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1522 124 386 CBL-interacting serine-threonine protein kinases AT5G35410 33.840 1.21e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Gso11g1522 Pkinase 5.4e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1522 K00908 - gmx:100816625 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1522 11 17722239 17728205 Gso11g1522 11 17722239 17728205 ECH
Gso12g0564 12 5069264 5076412 Gso11g1522 11 17722239 17728205 GST