Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1492 ATGGGAAATCTTGTACTTAACCACAAAATTATGCTTCATCTTTGGCTAGTTGCTTGGATGTGCTTAGGTGCATGCTCAGCTCAATTGTCTTACGACCAAAACAATTGTACTCTGAATGAAATTGGGCAAGGGGCAAGGTACAGTTGCAAGTCAACTCAGGATTCATGCAGAACATTCTTGGTGTATAGAGCAAATAAGCATTTCAACACCATTTCACAAGTTTCAAAGCTCTTCAACATGAACTCTGATGAGGTGCTACAAAAAAACAACCTCACATCTTCTTCTTTGTTTGATGTACTCAAACAAGGTAAAGAGGTTCTTATTCCTGTTAATTGCTCCTGCTCTGGAGGGTATTTTCAAGCCAGTTTAAGCTATAAAGTCCTTGACAACACAACATACTCCGAGATTGCTTGTGGTGTTTTTGAAGGGCTGCTGAAACATCTCACACTGGCTGAGGAGAACCTTTCACAAGGTAATAAGCCAGAAGCTGATTCTGAGCTTCATGTTCCTCTCGTATGTGCTTGTTCTGAAAGTTACAATTTCACAAGGAGCATGAAGGTGAAGTACCTTGTCACATACCCTTTAGTACTAGGAGATGATCCTGACAAATTGAGTAAAAAATTTGGCATTTCAATTGAAGAATTCTATGCAGTTAATAGCTTGAATCCCTTGTCAACTGTTTATCCTGATACAGTTGTTTTGGTTCCATTAACGGATGGTCCTATCAGAATACTTGATATTCCTGATTCTCCTTCTCCACCTCCTGGTTTTCTTCTCACAAATCCAGTGGTTACAACTGAGGAATCAACGCAATCGTCGAATATGTACATTGCAGGATCGGTTATAGGATTCTTTTTGTTCATAGCATTGCTTGCAAGTGGATTGTACATGAAGAGAATGAGGAAAAGTGATGTTGTCCATTCTTTTAGTCAAACAAACTCCCTCACTTTGTTGTCTCCAACTAGAAGCTCTCATATATCTACCCAAACGGGTAAAAGCTCTACAACTTGGTGCCTTTCCCCGGATCTTCTTGTTGGAATAAAGTACTACTTACTCAATTACAGCATGGAAGAGCTCCAAAAGGCCACCAAGTATTTCAGTGAAGAAAACAAGATCTGTTGCAACCAGGGTCACGACAGTGACTTTGTCTACAAGGGCTCGGTCGATGATCATGAGGTGATGATAAAGAAGATGAGATTGGCAGACACACAACAGGTGATTGATTTACATTCTAAAATCAACCACACTAATATTGTGAACTTGCTTGGTGTTTGTTATATTGGTGATGAGAGCAATGATGACTCATGGTCTTATTTAGTTTTTGAGTTGCCTAAGAATGGATGCTTGAGGGACTGCTTATCTGATCCATGCAACCCTCTAAATTGGTACAAAAGGACACAAATAGCCTTTGATATTGCAACATGTCTTTACTATTTACATTGTTGTTCTTTTCCTTCCTATGCTCACATGAATGTTAGTAGTAGGAATATATTCATAACAGCAAACTGGAGGGGGAAACTGGCAGATGTTGGAAGAGCATTGGCTGCCAGTGTCACACCTACCAAAAGAAATGGTGTGGAAATTCCCAAAGGATTGGTGGCACCAGAATACCTCTTACATAATGGTTTGGTTTCTGAAAAAGTGGACATTTTTGCATTTGGGGTTGTTTTGCTTGAGTTGATCTCAGGAAGGGACAACTTTGATGGAAAAGCAATCAAAGATTCCCTTGGATTTTGGTTGGGGGAAGCCAGTGAAGGGGGCTGTTTTGAAGGGTTAAGGAGCTTCATGGATCCAAATCTGAAGGATTTTTCTCTTCCTGAGGCTTTATGTTTGTCTTTCTTAGCAAAGGATTGTGTGGCAGATGATCCCCTGCATAGGCCATCCATGGATGATATCATGAAAGTCCTTTCAAAAATGGTTTAG 1923 0.4009 MGNLVLNHKIMLHLWLVAWMCLGACSAQLSYDQNNCTLNEIGQGARYSCKSTQDSCRTFLVYRANKHFNTISQVSKLFNMNSDEVLQKNNLTSSSLFDVLKQGKEVLIPVNCSCSGGYFQASLSYKVLDNTTYSEIACGVFEGLLKHLTLAEENLSQGNKPEADSELHVPLVCACSESYNFTRSMKVKYLVTYPLVLGDDPDKLSKKFGISIEEFYAVNSLNPLSTVYPDTVVLVPLTDGPIRILDIPDSPSPPPGFLLTNPVVTTEESTQSSNMYIAGSVIGFFLFIALLASGLYMKRMRKSDVVHSFSQTNSLTLLSPTRSSHISTQTGKSSTTWCLSPDLLVGIKYYLLNYSMEELQKATKYFSEENKICCNQGHDSDFVYKGSVDDHEVMIKKMRLADTQQVIDLHSKINHTNIVNLLGVCYIGDESNDDSWSYLVFELPKNGCLRDCLSDPCNPLNWYKRTQIAFDIATCLYYLHCCSFPSYAHMNVSSRNIFITANWRGKLADVGRALAASVTPTKRNGVEIPKGLVAPEYLLHNGLVSEKVDIFAFGVVLLELISGRDNFDGKAIKDSLGFWLGEASEGGCFEGLRSFMDPNLKDFSLPEALCLSFLAKDCVADDPLHRPSMDDIMKVLSKMV* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1492 640 SUPERFAMILY Protein kinase-like (PK-like) 350 636 IPR011009 -
Gso11g1492 640 ProSiteProfiles Protein kinase domain profile. 285 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1492 640 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 11 639 - -
Gso11g1492 640 Gene3D Transferase(Phosphotransferase) domain 1 445 640 - -
Gso11g1492 640 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 11 639 - -
Gso11g1492 640 ProSiteProfiles LysM domain profile. 191 235 IPR018392 -
Gso11g1492 640 Gene3D Phosphorylase Kinase; domain 1 347 440 - -
Gso11g1492 640 Pfam Protein tyrosine and serine/threonine kinase 392 571 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1492 Gso-Chr11 17373610 17375811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1492 47 640 Receptor kinase-like Gene Family AT2G23770 29.344 1.79e-63 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso11g1492 PK_Tyr_Ser-Thr 4.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1492 - - gmx:100812531 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1492 11 17373610 17375811 Gso11g1492 11 17373610 17375811 ECH
Gso12g0637 12 6035145 6037486 Gso11g1492 11 17373610 17375811 GST