Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1474 ATGGCGGAGCTTAATGTAAGAAGCAGCAGCAGCAAAAGGAGGGTTTTAGGTGGTATTTTGAAGTTGAAGGGTGTGTTGGAAAAGCTACAAAAGAGTATCTTATTTCGCAGAAATAATAAATCAAGTTGTTCCTATTGTGGAGAATATGATTATGAAGAAGGAGATCATAACACAGTGTGTGTGCAAGAAGGACATTTTGCAGTGATTGCTGAGCATGAAGAGGAGATCACAAAGAGATTCTTGGTGCCATTGAGCTGTTTAAACAACTCAACATTCTTGAGTCTATTGGAGAAAGCAGCACAAGAGTATGGCTTTGATCAACATGGTGCACTAACCATTCCTTGCAGGCCAAGTGAACTTGAGAGGTTGTTATCGGCACAGCAATGGAAAGAAAGAGGGAGATTCTTCTGA 411 0.4063 MAELNVRSSSSKRRVLGGILKLKGVLEKLQKSILFRRNNKSSCSYCGEYDYEEGDHNTVCVQEGHFAVIAEHEEEITKRFLVPLSCLNNSTFLSLLEKAAQEYGFDQHGALTIPCRPSELERLLSAQQWKERGRFF* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1474 136 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 25 130 - -
Gso11g1474 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 130 IPR003676 GO:0009733
Gso11g1474 136 Pfam Auxin responsive protein 44 125 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1474 Gso-Chr11 17112517 17113364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1474 29 115 Calmodulin-binding Proteins AT5G20810 41.379 4.40e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1474 - K14488 gsj:114373988 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1474 11 17112517 17113364 Gso11g1474 11 17112517 17113364 ECH
Gso12g0646 12 6205576 6206360 Gso11g1474 11 17112517 17113364 GST
Gso12g1487 12 38051960 38052771 Gso11g1474 11 17112517 17113364 PCT
Gso11g3356 11 49383650 49384315 Gso11g1474 11 17112517 17113364 PCT
Gso11g1474 11 17112517 17113364 Gso12g1487 12 38051960 38052771 PCT
Gso11g1474 11 17112517 17113364 Gso11g3356 11 49383650 49384315 PCT