Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1470 ATGACAGTCACCGCTTCCTTACACCGTCTTTCTCGTCTCCGATTCATCGCCAAACCCCAACCTTTCCTATCTCCTCATTCAATCCCCTCCCATTTCTCTCTCACCCCCAAAACCAAGAAAGCGAATCGATTCCGATTCCTCTCAATGGCTGCGGAACCCAAGGAATCGCCTTCCAACAACCCCGGTCTCCATACAACTCCTGACGAAGCCACCAAGGGTTACATCATGCAACAAACTATGTTTAGAATCAAAGACCCCAAAGTGAGCCTCGATTTTTATTCTCGAGTCTTGGGCATGTCTTTGCTTAAGAGATTGGATTTTCCGGAGATGAAGTTCAGCCTGTACTTCATGGGCTATGAGAATACGGCAGAAGCTCCAAGTAATCCAATTGATAAAGTGGTTTGGACCTTTTCTCAGAAGGCTACAATTGAACTGACACATAATTGGGGTACTGAAAGCGATCCAGAGTTCAAAGGGTACCACAATGGCAATTCTGAACCTCGTGGCTTTGGACACATTGGTGTAACTGTTGATGACACATACAAGGCATGTGAAAGATTTCAGAATCTGGGAGTTGAGTTTGTTAAGAAACCAGAAGATGGGAAAATGAAAGGTATAGCATTTATTAAAGATCCTGATGGATACTGGATTGAAATCTTTGATCGGAAAACAATAGGAAATGTAACACAAACTGCTGCTTAG 702 0.4359 MTVTASLHRLSRLRFIAKPQPFLSPHSIPSHFSLTPKTKKANRFRFLSMAAEPKESPSNNPGLHTTPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDTYKACERFQNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRKTIGNVTQTAA* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1470 233 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 78 219 IPR004360 -
Gso11g1470 233 ProSitePatterns Glyoxalase I signature 1. 78 99 IPR018146 GO:0004462|GO:0046872
Gso11g1470 233 TIGRFAM glyox_I: lactoylglutathione lyase 64 227 IPR004361 GO:0004462|GO:0046872
Gso11g1470 233 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 75 222 IPR037523 -
Gso11g1470 233 PANTHER LACTOYLGLUTATHIONE LYASE 37 229 - -
Gso11g1470 233 ProSitePatterns Glyoxalase I signature 2. 163 179 IPR018146 GO:0004462|GO:0046872
Gso11g1470 233 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 37 229 - -
Gso11g1470 233 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 63 222 IPR029068 -
Gso11g1470 233 CDD GlxI_Zn 76 220 - -
Gso11g1470 233 Gene3D - 50 229 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1470 Gso-Chr11 17064031 17067672 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1470 22 233 Calmodulin-binding Proteins AT1G08110 73.272 2.25e-112 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1470 K01759 - gmx:100779383 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1470 11 17064031 17067672 Gso11g1470 11 17064031 17067672 ECH
Gso12g0649 12 6245829 6250810 Gso11g1470 11 17064031 17067672 GST