Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1448 ATGGGTCAGATCCAGTACTCCGAGAAGTACTTCGATGACACTTACGAATATAGACATGTGGTTCTTCCTCCTGAAGTCGCAAAACTGCTTCCCAAGAATCGTCTTCTCTCCGAAAATGAGTGGCGGGCAATTGGGGTTCAGCAGAGCCGTGGCTGGGTTCATTATGCAATTCATCGCCCTGAGCCACACATAATGCTCTTCAGGAGGCCTTTGAATTATCAGCAGCAGCAGGAAAACCAGGCCCAGCAAAGCATGCTTGTCAAATGA 267 0.4869 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQSMLVK* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1448 88 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Gso11g1448 88 SMART CKS_2 3 72 IPR000789 GO:0016538
Gso11g1448 88 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
Gso11g1448 88 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Gso11g1448 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 85 - -
Gso11g1448 88 Gene3D - 1 84 IPR036858 GO:0016538
Gso11g1448 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Gso11g1448 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Gso11g1448 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Gso11g1448 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Gso11g1448 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1448 Gso-Chr11 16817525 16818949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1448 1 88 Core Cell Cycle Gene Families AT2G27960 95.455 3.08e-59 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1448 K02219 - gmx:100786340 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1448 11 16817525 16818949 Gso11g1448 11 16817525 16818949 ECH
Gso12g0670 12 6548221 6549636 Gso11g1448 11 16817525 16818949 GST