Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1421 ATGAGATTGGAGAAGTGTTGGTTCTGTTCTTCTACCACATACCCTGGACATGGAATCCAGTTTGTTCGTAACGATGCCAAGATTTTTCGGTTTTGTAGATCTAAATGCCACAAAAACTTCAAAATGAAGAGGAACCCTCGGAAAGTAAAATGGACAAAGGCATATAGACGAGTGCATGGAAAGGATATGACACAGGACTCAACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCAGAGAGATATGACAGGAATCTTGCTGAGAATGTCCTCAAGGCCATTCCAAAGATTGATAAAATCCGAGTCGCCAGGGAGGAGAAACACCATAAGAATAGGATGAAAGGCAAGAAACAGAAGCTGCATATGGAGGCAGTTAGGGAGTTGGAACAGGGCATCAGTCTGGTCAAAGCTCCATCTGTGCTTCAAAAGGACCCTTTTCTCACTTTACCCAAGATCAAAGTTGGGGTTTCCCAACAACAACAATCAGAGGAGAATCATCCCATGGAAGAGTGA 510 0.4353 MRLEKCWFCSSTTYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVAREEKHHKNRMKGKKQKLHMEAVRELEQGISLVKAPSVLQKDPFLTLPKIKVGVSQQQQSEENHPMEE* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1421 169 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Gso11g1421 169 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Gso11g1421 169 SMART 4TRASH 6 44 IPR011017 -
Gso11g1421 169 PANTHER 60S RIBOSOMAL PROTEIN L24 1 169 IPR000988 -
Gso11g1421 169 PANTHER BNAA04G10330D PROTEIN 1 169 - -
Gso11g1421 169 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Gso11g1421 169 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1421 Gso-Chr11 16357745 16360732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1421 1 169 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 68.639 5.31e-80 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1421 K02896 - gmx:100799024 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1421 11 16357745 16360732 Gso11g1421 11 16357745 16360732 ECH