Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1410 ATGGAAGACACTACAACAACGGAGGATCTTACCGACGACCTCCATAGCCTCAGCTTCACTTCCACCACCACCACCACCACCACCGCTGAAATCAAACGCAGCACAAGCTTCAGCTCCTCCACCACCACCACCACCACCACCATAATAACCCCCTCAACCTCCTCCCACTTCAAGCCCCACCGCCCCCTCTCCCTCTCCCTCTCCGACCTCCGCTTCACGCGCCGCCTCGGCTCCGGCGACATGAGCGCCGTCTACCTCGCCGTGCCCAAGGAAGGTAACGACGGCGCGGTGTTCGCGGCGAAGGTGATGGAGAAGGAGGACTTGGCGAGAAGGAACAAGGAAGGGAGGGCGAGGACAGAGAGGGAAATTCTTGAAATGTTGGATCATCCTTTTCTTCCCACGCTCTACGCCTCCATCCACACGCCTAAGTGGCTCTGTTTCTTGACGCTGTTCTGCCCCGGCGGTGACTTGCACGTCCTCCGCCAGCGATTCCCCAACAAACGCTTCCTCGAATCCGCCGTCAGATTTTATGCATCGGAAGTGTTGTTGGCACTTGAATACTTACACATGTTGGGGGTAATCTACCGCGACCTGAAGCCGGAAAACGTGTTAATCCGATCAGATGGCCACATAATGCTCACAGACTTCGACCTTTCCTTAAAATGCGACGATTCCACATCAACGGCACAAATCATCTCCGATCAAAAAACCCTTCCCACAGTCCCACGCAACAATTCCCACGTGGAACCCGCACGTGCCACCTCTTCTTCATGCATGATCTCCAACTGCATAGTCCCAACGGCATCGTGCTTCAACCCAAAACGCAGCCGAAAAAAGAAACAAACACATTTTAACGGGCCCACCTTCGTGGCCGAACCCGTTAACGTCCGGTCCATGTCGTTCGTGGGGACCCACGAGTACTTGGCGCCGGAGATCGTGTCCGGTGAGGGACATGGTAGCGCCGTGGACTGGTGGACGTTGGGAATATTCATGTTTGAACTGTTTTATGGTGTGACACCATTCAAGGGCATGGACCACGAGCTAACCCTAGCGAACGTTGTGGCTCGGGCCCTCGAGTTCCCGAAGGAACCCGCGGCTTCCGCCGCCATGAAAGACCTTATTTCGCAGCTGCTGGTTAAGGACCCGGCGAAGAGGCTGGGGTCGGTGATGGGGGCTTCGGCCATCAAGCAGCACCCGTTTTTTCAAGGCGTGAATTGGGCGTTGCTGAGGTGTACGCCTCCACCCTTTGTACCCCCTCCTAGTAGTGCGAATGCTGTATATGATGATCATGAAAGTTGTCCTGAGATTTTCATTGACTGTTTTTAA 1326 0.5505 MEDTTTTEDLTDDLHSLSFTSTTTTTTTAEIKRSTSFSSSTTTTTTTIITPSTSSHFKPHRPLSLSLSDLRFTRRLGSGDMSAVYLAVPKEGNDGAVFAAKVMEKEDLARRNKEGRARTEREILEMLDHPFLPTLYASIHTPKWLCFLTLFCPGGDLHVLRQRFPNKRFLESAVRFYASEVLLALEYLHMLGVIYRDLKPENVLIRSDGHIMLTDFDLSLKCDDSTSTAQIISDQKTLPTVPRNNSHVEPARATSSSCMISNCIVPTASCFNPKRSRKKKQTHFNGPTFVAEPVNVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGMDHELTLANVVARALEFPKEPAASAAMKDLISQLLVKDPAKRLGSVMGASAIKQHPFFQGVNWALLRCTPPPFVPPPSSANAVYDDHESCPEIFIDCF* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1410 441 Gene3D Transferase(Phosphotransferase) domain 1 156 419 - -
Gso11g1410 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Gso11g1410 441 ProSitePatterns Protein kinases ATP-binding region signature. 76 101 IPR017441 GO:0005524
Gso11g1410 441 PANTHER FLIPPASE KINASE 1-RELATED 5 441 - -
Gso11g1410 441 MobiDBLite consensus disorder prediction 23 55 - -
Gso11g1410 441 Pfam Protein kinase domain 298 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1410 441 Pfam Protein kinase domain 73 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1410 441 SUPERFAMILY Protein kinase-like (PK-like) 41 427 IPR011009 -
Gso11g1410 441 SMART serkin_6 70 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1410 441 PANTHER OS11G0150700 PROTEIN 5 441 - -
Gso11g1410 441 ProSiteProfiles Protein kinase domain profile. 70 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1410 441 Gene3D Phosphorylase Kinase; domain 1 72 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1410 Gso-Chr11 16249884 16253895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1410 8 441 AGC Kinase Gene Family AT3G44610 62.335 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso11g1410 Pkinase 1.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1410 K08286 - gmx:100792154 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1410 11 16249884 16253895 Gso11g1410 11 16249884 16253895 ECH