Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1406 ATGAGTTTTCAAGGTTTTCTTTCTCTCCAATCAATGTCTGCAACCTGCGGCTTCTTGTTCTTCGCCTTCACCCTTCTGTTTTCCTTCTTCTCGTTCCTCGTTTTTGTCTCGAGGATGAAGCCGTGGTGTAACTGCGATGTTTGCAAGAGCTACTTGACGGTGAGTTGGCTGAACAAGTTTCCAAATCTCTGCGACTGGTACACTCATCTTCTGCGCAAATCCCCAACCGGCACCATCCACGTGCACGTGCTGGAGAACACCATAACCTCGAACCCCGTCAACGTGGAGTACATTCTCAAGACGAATTTCCAAAACTACCCCAAGGGGAAACCGTTCTCCGTCATCCTCGGCGATCTTCTTGGAAGAGGAATCTTCAACGTCGACGGCGAATCGTGGAAGTTACAACGCAAGATGGCGAGTTTGGAGCTCGGGAGCGTCGCTATTCGAACGAACGCGATGGAATTGGTCAACGAGGAGATCCACGCGCGTCTGATCCCATTCATAATGGGATCAGTCACGCACGACGAATTAAACGACTCCGTCTGCGTTTTGGATTTGCAAGATATATTACGAAGATTCTCGTTCGACAACATATGCAAATTCTCGTTCGGTCTCGACCCGGGCTGTCTCCTACCGAATCTCCCAGTCTCAAACCTCGCCGACGCGTTTGACTTGGCCTCGAAGCTTTCCGCGGAACGCGCCATGAACGCGTCGCCGTTTATTTGGAAACTAAAACGACTCCTCAACGTAGGTTCCGAAAGAAAACTGAGAGAAGCAATCAACGTTGTAAACGACGTCGCTAATGAGATGATCAAACAGAGAATAGAAATGGGGTTCAACACGCGGAACGACCTTCTCTCGCGGTTCACGGGATCCATAAACGACGACGTTTATTTAAGAGACATTGTGGTGAGTTTTCTCTTAGCGGGCCGTGACACCATCGCCTCCGGGTTAACGGGCTTTTTTATGTTGTTGTCTAAAAGCCCGGAGGTGGAGGAGTTGATTAGAGAGGAGGCGGGCCGGGTGGTGGGCCCGGGCCAGGAGTTTCCTTCGTTTGAACAAATCCGCGAAATGCATTACCTGAACGCGGCGATTCACGAGAGCATGAGGCTGTTCCCACCGATTCAGTTCGATTCGAAGTTCGCCACGGAGGATGACGTGTTGCCAGATGGCACTTTTGTGAGAAAGGGTAGTAGGGTAACTTACCACCCTTACGCGATGGGCCGAATGGAGAACATTTGGGGGCCCGATTGTCTCGAGTTCAGGCCCGAAAGATGGCTGCGTGATGGAGTGTTCGTGCCAGCGTGTCCTTTTAAGTACCCTGTTTTTCAGGCTGGGGTAAGGGTGTGTTTGGGGAAGGACTTGGCTTTGATGGAGATGAAGTCCGTTGTGCTTGCGTTGGTTCGGAGGTTTGATATTCGGGTCGTTCAATCGGGCCAGGAGCCCCGGTTCGAGCCCGGTTTAACCGCTACTTTGAGAGGCGGGTTGCCGGTTCGGGTTCGGGTTTGTGAAAGGAAATGA 1521 0.5148 MSFQGFLSLQSMSATCGFLFFAFTLLFSFFSFLVFVSRMKPWCNCDVCKSYLTVSWLNKFPNLCDWYTHLLRKSPTGTIHVHVLENTITSNPVNVEYILKTNFQNYPKGKPFSVILGDLLGRGIFNVDGESWKLQRKMASLELGSVAIRTNAMELVNEEIHARLIPFIMGSVTHDELNDSVCVLDLQDILRRFSFDNICKFSFGLDPGCLLPNLPVSNLADAFDLASKLSAERAMNASPFIWKLKRLLNVGSERKLREAINVVNDVANEMIKQRIEMGFNTRNDLLSRFTGSINDDVYLRDIVVSFLLAGRDTIASGLTGFFMLLSKSPEVEELIREEAGRVVGPGQEFPSFEQIREMHYLNAAIHESMRLFPPIQFDSKFATEDDVLPDGTFVRKGSRVTYHPYAMGRMENIWGPDCLEFRPERWLRDGVFVPACPFKYPVFQAGVRVCLGKDLALMEMKSVVLALVRRFDIRVVQSGQEPRFEPGLTATLRGGLPVRVRVCERK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1406 506 PANTHER CYTOCHROME P450 18 499 - -
Gso11g1406 506 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1406 506 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1406 506 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1406 506 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1406 506 Pfam Cytochrome P450 83 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1406 506 Gene3D Cytochrome P450 51 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1406 506 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1406 506 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1406 506 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1406 506 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1406 506 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1406 506 SUPERFAMILY Cytochrome P450 61 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g1406 506 PANTHER CYTOCHROME P450 94C1 18 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1406 Gso-Chr11 16178747 16180645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1406 33 501 Cytochrome P450 AT2G27690 60.669 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1406 K20624 - gmx:100795314 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1406 11 16178747 16180645 Gso11g1406 11 16178747 16180645 ECH
Gso12g0709 12 7121360 7123141 Gso11g1406 11 16178747 16180645 GST