Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1356 ATGCAGACATGGAAAGGGGGAGAGGATGCCAACCATACCTATTTTAACAGCAAGGCTATGCTATGTTATGAGTTTAATGCAGAGGCAAATCATGATTTGTGTCCCAAGTGTATATATGCGTATGTCCCATCGGTGATACTGATAAAGCGTCCTCCATATGAAGAACCCCTGGATTGGCCAACTCGGAAAAGAGTAGCTTTGGGATCTGCAATGGGTCTTTCATATTTGCATGATCATTGTGACCCAAAGATTATTCATCGTGATGTGAAGGCTGCCAACATATTGCTGGATGAAGAGTTTGAGGCTGTTGTTGGGGACTTTGGATTGGCCAAACTTATGGATTACAAGGACACGGTGAAAATTCAAAAAAACCTGGGGCTGCTCATAATGTTCGACTATATTCAATTGCTTCCACAAGGTATGGGGACTTTTTTGATGGAAAAACTGCCAGCTTGTGTGTGCGTCGTGCTGTTTATTATGATCCTGTGA 489 0.4274 MQTWKGGEDANHTYFNSKAMLCYEFNAEANHDLCPKCIYAYVPSVILIKRPPYEEPLDWPTRKRVALGSAMGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTVKIQKNLGLLIMFDYIQLLPQGMGTFLMEKLPACVCVVLFIMIL* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1356 162 Gene3D Transferase(Phosphotransferase) domain 1 10 130 - -
Gso11g1356 162 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1356 162 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 46 125 - -
Gso11g1356 162 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1-RELATED 46 125 - -
Gso11g1356 162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672|GO:0006468
Gso11g1356 162 SUPERFAMILY Protein kinase-like (PK-like) 53 120 IPR011009 -
Gso11g1356 162 Pfam Protein kinase domain 62 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1356 Gso-Chr11 15378046 15381847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1356 47 118 Receptor kinase-like Gene Family AT1G71830 90.278 3.03e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gso11g1356 Pkinase 2.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1356 K13418 - gmx:100777573 333.954