Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1332 ATGGACGTTGATTCCTCGATGGTGCCGGAGCCCGATCACGATCCGCCGGTGCAGAACCATGCCGAGAGAGACCAGCTAGGAGACTCACCGTCGCCGTCGTTGTCGGAGGGGGGCGGATCTCTGGCTCAGTCGCCGCCTCAACAACAGCAGCAGCAGCAGCAACAGCCGCCGCCGGCCACGGCGGCTCAGGTGCACCAGCCCAATTCTCTGGTTGGTCCGAGGCTCGCGCCGACATACTCAGTGGTAAATGCGATTTTGGAGAAGAAGGAGGACGGGCCCGGGCCGCGGTGCGGCCACACGTTGACGGCGGTGGCGGCGGTCGGAGAGGAGGGGACGTCGGGGTACATTGGTCCGAGGCTGATTTTGTTCGGCGGTGCCACTGCCCTTGAAGGGAATTCCGCGGCCTCAGGGACTCCTTCATCCGCCGGAAATGCTGGCATACGTTTAGCTGGTGCCACTGCTGATGTCCACTGTTATGATGTCATAAGTAATAAATGGTCTAGGATAACTCCCATTGGCGAGCCTCCAACCCCAAGGGCTGCACATGTGGCAACTGCTGTGGGTACCATGGTAGTTATTCAGGGTGGCATTGGCCCTGCTGGTTTGTCTGCAGAGGACCTTCATGTTCTTGATCTCACACAGCAACGGCCACGATGGCATAGAGTTGGTGTTCCTGGCCCTGGACCGGGACCACGCTATGGACATGTTATGGCTTTGGTGGGGCAGAGGTATCTCATGGCAATCGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCCGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTATGCAACTGCCAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGTGTTCCATTGTCAAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGTTGGGAATGGGCCATTGCCCCTGGTGTCTCGCCATCTCCAAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCCCTTGGAGGAGGACGGATGGTTGAAGATTCATCGAGTGTTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACCAAATCTGTTGTTACCAGTCCAAGAACGGGTAGATACAGCGCTGATGCAGCAGGTGGAGATGCTGCAGTTGAGTTGACACGGCGTTGTAGGCATGCGGCTGCTGCTATTGGCGACTTAATTTTTATTTATGGTGGTTTACGTGGCGGTGTCTTGCTGGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAACTGCTGCTTCACATGCTGCAGCAGCAGCAGCTGCGTCTAATGTACAAGCTGGACGGCTACCTGGACGGTATGGATTTATTGATGATAGAACAAGGCAAACCATGCCCGAAGCAGCTTCTGATGGTTCAGTAGTTTTGGGAAATCCAGTTGCCCCCCCTGTAAATGGCGATATGTATACTGATATCAGCACTGAAAATGCCTTGCTCCCGGGAACTAGAATTTTGAACAGGCGAACGAGCAAAGGAGTTGAGTATCTAGTTGAAGCATCAGCTGCGGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCTAAGGCACGGCAAGTGAACGGTGAAGTGGAATTGCCTGACCGAGACCGTGGGGCTGAGGCAACACCTAGTGGGAAACAGATATCTTCCTTGATTAAGCCTGATTCTGCTGGGTCAAATAGCATTCCTCCTGGTGGAGTGAGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCAATTGATCAGTTTGAGAATGAAGGCAGGCGGGTCAGTTATGGGACTCCTGAAAGTGCAACAGCTGCTAGAAAATTATTAGACCGGCAGATGTCTATCAATAGTGTCCCAAAGAAGGTTGTAGCTCACCTTTTAAAGCCTCGTGGCTGGAAACCGCCCGTTCGCCGACAGTTTTTCTTAGACTGCAATGAAATTGCAGATCTTTGTGATAGTGCAGAACGCATATTTTCAAGTGAACCGAGTGTCTTACAGCTTAGGGCTCCAATTAAAATATTTGGTGATTTGCATGGGCAATTTGGAGATCTCATGCGCCTCTTTGAAGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATATATCGACTATCTATTCCTCGGAGATTATGTTGATAGGGGCCAACACAGCCTGGAAACTATTAGCCTTCTGCTTGCTCTGAAGGTTGAGTATCCAAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGTGAGAGAGACGGAATTTGGACATGGCACCGTATAAACCGTCTGTTTAATTGGCTTCCTCTAGCAGCCCTAATTGAGAAAAAAATTATTTGCATGCATGGTGGTATTGGTCGTTCAATAAATCATGTGGAACAAATTGAGAATATTCAGCGTCCAATTACGATGGAAGCAGGATCAATTGTGCTTATGGATCTATTATGGTCTGATCCTACAGAGAATGACAGTGTTGAAGGACTGCGACCAAATGCTAGGGGTCCAGGATTAGTCACTTTTGGGCCTGATCGTGTAATGGAATTTTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGACATTTGATCACACTTTTCTCTGCTACAAACTACTGTGGTACGGCAAATAATGCTGGGGCAATATTAGTTTTGGGTAGAGATCTCGTTGTGGTTCCTAAATTGATTCATCCATTACCGCCTGCAATTTCTTCACCAGATACGTCACCAGAACGTCATATTGAGGATACATGGATGCAGGAGTTGAATGCTAACAGACCACCAACACCAACTAGAGGCCGTCCTCAAGTAACAAATGACCGAGGTTCTCTTGCTTGGATATAG 3045 0.4995 MDVDSSMVPEPDHDPPVQNHAERDQLGDSPSPSLSEGGGSLAQSPPQQQQQQQQQPPPATAAQVHQPNSLVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTSGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVISNKWSRITPIGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQAGRLPGRYGFIDDRTRQTMPEAASDGSVVLGNPVAPPVNGDMYTDISTENALLPGTRILNRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSAGSNSIPPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFEEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPDTSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRGSLAWI* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1332 1014 MobiDBLite consensus disorder prediction 990 1014 - -
Gso11g1332 1014 Gene3D - 76 248 IPR015915 GO:0005515
Gso11g1332 1014 Pfam Kelch motif 337 383 IPR011498 GO:0005515
Gso11g1332 1014 SUPERFAMILY Metallo-dependent phosphatases 669 973 IPR029052 -
Gso11g1332 1014 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1008 - -
Gso11g1332 1014 MobiDBLite consensus disorder prediction 24 67 - -
Gso11g1332 1014 MobiDBLite consensus disorder prediction 1 74 - -
Gso11g1332 1014 SMART pp2a_7 683 967 IPR006186 GO:0016787
Gso11g1332 1014 SUPERFAMILY Kelch motif 151 440 IPR015915 GO:0005515
Gso11g1332 1014 PIRSF STPPP_BSU1 44 1014 IPR012391 GO:0004721|GO:0009742
Gso11g1332 1014 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1008 - -
Gso11g1332 1014 Gene3D - 249 465 IPR015915 GO:0005515
Gso11g1332 1014 Pfam Galactose oxidase, central domain 231 284 - -
Gso11g1332 1014 CDD MPP_Bsu1_C 663 965 IPR041758 -
Gso11g1332 1014 Pfam Calcineurin-like phosphoesterase 711 918 IPR004843 GO:0016787
Gso11g1332 1014 Gene3D - 647 982 IPR029052 -
Gso11g1332 1014 ProSitePatterns Serine/threonine specific protein phosphatases signature. 780 785 IPR006186 GO:0016787
Gso11g1332 1014 MobiDBLite consensus disorder prediction 990 1005 - -
Gso11g1332 1014 MobiDBLite consensus disorder prediction 575 589 - -
Gso11g1332 1014 PRINTS Serine/threonine phosphatase family signature 711 738 IPR006186 GO:0016787
Gso11g1332 1014 PRINTS Serine/threonine phosphatase family signature 746 773 IPR006186 GO:0016787
Gso11g1332 1014 PRINTS Serine/threonine phosphatase family signature 779 803 IPR006186 GO:0016787
Gso11g1332 1014 PRINTS Serine/threonine phosphatase family signature 817 843 IPR006186 GO:0016787
Gso11g1332 1014 PRINTS Serine/threonine phosphatase family signature 847 874 IPR006186 GO:0016787
Gso11g1332 1014 PRINTS Serine/threonine phosphatase family signature 907 927 IPR006186 GO:0016787
Gso11g1332 1014 PRINTS Serine/threonine phosphatase family signature 929 945 IPR006186 GO:0016787
Gso11g1332 1014 MobiDBLite consensus disorder prediction 558 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1332 Gso-Chr11 14729711 14744206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1332 675 910 Calmodulin-binding Proteins AT5G63870 29.044 6.25e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1332 - - gmx:100816091 1887.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1332 11 14729711 14744206 Gso11g1332 11 14729711 14744206 ECH
Gso12g0777 12 8028120 8042455 Gso11g1332 11 14729711 14744206 GST
Gso12g1597 12 39503663 39515553 Gso11g1332 11 14729711 14744206 PCT
Gso11g3257 11 48357809 48368342 Gso11g1332 11 14729711 14744206 PCT
Gso11g1332 11 14729711 14744206 Gso12g1597 12 39503663 39515553 PCT
Gso11g1332 11 14729711 14744206 Gso11g3257 11 48357809 48368342 PCT