Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1309 ATGTTCGTTTCTTCTTCATCGCATGTTCCCCGTTGGCTCCAAGTTCTCCTCACGGAGAAGTTCTACAACGTTTGCATAATTCACGAAGAGGCAAAGAAGAACGAGAAGAACGTTTATTGCTTGGATTGTTGCATTAGCCTCTGCCCTCACTGTTTGTCCCCCCACCGCTCTCATAGACTCTTGCAGATTAGAAGATATGTGTATCACGATGTTATAAGGTTGGATGATGCTGCAAAGTTAATTGACTGCAATTCCGTTCAATCCTACACAACCAACAGCGCAAAAGTGGTATTTTTAAACCAAAGGCCACAGACAAGGAACTTCAGAGGCTCCGGCAATTTCTGCAGCACCTGTGACAGAAGCCTGCAAGACCCATACCACTTCTGCTCCCTCTCTTGCAAGATAAATTATCTCGTCAGAACAACGGACTCTCTCTGCGGCTACCTCTTCGAGTGCAACTACCTGCCGCTACTGGAATCTGGGCTCGACGATGGTCTAATGATGACTCCTGATTCGGTTCTCGAACCGTCTGGTTCAGGGGGGTACGGAGGGGTGGATTGTAGGACCACCTTGGCTTGCACTGCCACCACCGAGATTGTGAGGAAGAAGAGGACCGGCGGTGCCGCTTTCCGGCTTCCGTTCCGGCCGGCGTGCTCGCCGGTCTCGGAAATCTCGGCGTGTCTCATGAACCGGAGGAAAGGGAACCCCCAGCGGGCCCCACTCCATTGA 729 0.5158 MFVSSSSHVPRWLQVLLTEKFYNVCIIHEEAKKNEKNVYCLDCCISLCPHCLSPHRSHRLLQIRRYVYHDVIRLDDAAKLIDCNSVQSYTTNSAKVVFLNQRPQTRNFRGSGNFCSTCDRSLQDPYHFCSLSCKINYLVRTTDSLCGYLFECNYLPLLESGLDDGLMMTPDSVLEPSGSGGYGGVDCRTTLACTATTEIVRKKRTGGAAFRLPFRPACSPVSEISACLMNRRKGNPQRAPLH* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1309 242 ProSiteProfiles Zinc finger B-box type profile. 20 63 IPR000315 GO:0008270
Gso11g1309 242 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 241 - -
Gso11g1309 242 PANTHER BNAC04G22060D PROTEIN 7 241 - -
Gso11g1309 242 Pfam PLATZ transcription factor 64 135 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1309 Gso-Chr11 14152489 14155196 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gso11g1309 PLATZ 3.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1309 - - gmx:100797977 511.531