Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g1306 | ATGGGTATACTACGTCGGTTGAAGACCGTCGTTGTCTGCGACGACGACCGTCGTAGAAAGGTCCACAATTCAAACACGGCTGTCAACAGCCCCGTCGTAGAAGTAACAACAGACTACGACGGGCATGGGGACACCACCGTCGTAGAAGTAACAACAGACTACGACGGTTGTCTACCCAGAACCGTCGTAGAAGGGTCCTATCACTACAACGAGGTTGCTTGTTGGGTGTCCACCGAGGAGAGACAAGCAGCAAGAATAAGAGGCTTATACCTCAGAGCAATTTTAAGGCAAGATATCAGCTTCTTTGACAAGGAAACCAATACTGGTGAGGTTGTTGGAAGGATGTCAGGTGACACACTTCTTATTCAAGAAGCCCTGGGAGAGAAGGTAAGAAAATTCATACAGTGTGTGGCATGTTTTTTAGGACGTTTAGTCATAGCATTCATCAAGGGTTGGCTTCTAACCCTTGTCCTTCTATCTTGTATTCCACCTCTTGTAATCTTTGGTTCCATGATGAGCTTTACTTTTGCAATGTTGCCATCCCGTGGACAAGCAGCTTATTCTGAAGCAGCAACTGTAGTAGAGCGCACAATTGATTCAATTCGACAAGTTGCATCATTTACAGGCGAGAGTCAAGCTACAGCTCAATACAATCAATCCTTAACCAAAGCTTACAGGACTGCAGTGCAAGATGGAGTGGTTGCTGGGAGGATAATAGACAGTGCTAAGATTCTTGCTTGGAGTTTTAGTGATTCAAATTTTTCAATTGGTGATGCATTAGTGACAGAAAATTTGCCTTCATTTGTTCATCATAAAAAGTGGTTTCCTGGAGCACAAGCTTTCGCGGTAGGTGTCACCAGTATTGTGTTTGTGTTAATCATTGGTTTTGGTTATGTAGCATTTTTCGTTCTCCGCAGAAGAAAGACACAAGAAGAAGTTGAAGATTGGGAACTGGAGTATTGGCCTCACAGGATAGGTTTCCATGAGATCGATGCAGCAACAAGGGGGTTTTCTGAAGAGAATGTGGCTGTTGTAGGAGGGACCGTGAAGGTATATAAAGGGGTTTTGCATGGGGTAGAAGTTGCAGTCAAGAGAATTCCTCAAGAAAGGGAAGAAGGGATGAGAGAGTTTTTGGCCGAGGTTTCAAGCCTTGGCAGAATGAAGCACAAAAATTTAGTAGGATTAAGAGGCTGGTGCAAAAAAGAAAAGGGAAATTTGATTCTAGTTTATGACTTCATGAGCAATGGAAGTTTAGACAAATGGATATTTGAGTGTGAAGAGGGAATGATGCTAACATGGGAAGAGAGGATTCAAGTTTTGAAAAATGTAGCCACAGGGATTCTATACCTGCATGAGGGTTGGGAAGTTAAGGTCTTGCATAGGGACATTAAAGCAAACAATGTTCTTCTTGATAAGGACATGAATGCAAGGCTGGGAGATTTCGGATTGGCTCGTATGCATGATCATCAGGGACAAGTGGTCAGCACAACAAGAGTAATAGGGACACTAGGATACATTGCTCCTGAAGTGATTCAAAGAGGAACAGCGTCAACTTTGTCTGATGTGTTTGGTTTTGGAATATTGGTGTTGGAAGTAATTTGCGGACGAAGACCTATTGAAGAACATAAGCCGGGGCTAATTGAATGGCTGATGTCCTTAATGGTGCAAGGCCAATTGCACAGTGCAATTGATGAAAGGTTGAAGGCTAAAGGGGGATACACCATAGAGGAAGGTGAGAGATTTCTTCATTTGGGTTTGTTGTGTTCACATACAGACCCTAGTATTAGACCAACAATGAGGCAGGTTGTGAAAATTTTGGAGGTGGAAATTGACAGCATTGAGTCTGATGAAGATAACATGGAAATGAGTTTGCTTGGAAAAATAAGATCAGCTACTACGTGGTCTAGAGCTGAATGTGCTTTACCATACAGTGGTTACCCTTCTTTTGATGAAGTTAAGATGTTCAGTTTTAATTCTAGGACTTCTAGAAGTGGCTCAAGTACCTTTCCAGGATCAGAATCAGAAATCACCAGTATTAATATGTAA | 2046 | 0.4252 | MGILRRLKTVVVCDDDRRRKVHNSNTAVNSPVVEVTTDYDGHGDTTVVEVTTDYDGCLPRTVVEGSYHYNEVACWVSTEERQAARIRGLYLRAILRQDISFFDKETNTGEVVGRMSGDTLLIQEALGEKVRKFIQCVACFLGRLVIAFIKGWLLTLVLLSCIPPLVIFGSMMSFTFAMLPSRGQAAYSEAATVVERTIDSIRQVASFTGESQATAQYNQSLTKAYRTAVQDGVVAGRIIDSAKILAWSFSDSNFSIGDALVTENLPSFVHHKKWFPGAQAFAVGVTSIVFVLIIGFGYVAFFVLRRRKTQEEVEDWELEYWPHRIGFHEIDAATRGFSEENVAVVGGTVKVYKGVLHGVEVAVKRIPQEREEGMREFLAEVSSLGRMKHKNLVGLRGWCKKEKGNLILVYDFMSNGSLDKWIFECEEGMMLTWEERIQVLKNVATGILYLHEGWEVKVLHRDIKANNVLLDKDMNARLGDFGLARMHDHQGQVVSTTRVIGTLGYIAPEVIQRGTASTLSDVFGFGILVLEVICGRRPIEEHKPGLIEWLMSLMVQGQLHSAIDERLKAKGGYTIEEGERFLHLGLLCSHTDPSIRPTMRQVVKILEVEIDSIESDEDNMEMSLLGKIRSATTWSRAECALPYSGYPSFDEVKMFSFNSRTSRSGSSTFPGSESEITSINM* | 682 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g1306 | 681 | ProSiteProfiles | Protein kinase domain profile. | 337 | 610 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g1306 | 681 | SMART | serkin_6 | 337 | 605 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g1306 | 681 | Gene3D | Phosphorylase Kinase; domain 1 | 299 | 412 | - | - | |
Gso11g1306 | 681 | Gene3D | Transferase(Phosphotransferase) domain 1 | 413 | 628 | - | - | |
Gso11g1306 | 681 | Gene3D | ABC transporter type 1, transmembrane domain | 61 | 262 | IPR036640 | GO:0005524|GO:0016021 | |
Gso11g1306 | 681 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 458 | 470 | IPR008271 | GO:0004672|GO:0006468 | |
Gso11g1306 | 681 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 74 | 238 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gso11g1306 | 681 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 69 | 236 | - | - | |
Gso11g1306 | 681 | MobiDBLite | consensus disorder prediction | 659 | 681 | - | - | |
Gso11g1306 | 681 | Pfam | ABC transporter transmembrane region | 73 | 235 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gso11g1306 | 681 | CDD | STKc_IRAK | 346 | 607 | - | - | |
Gso11g1306 | 681 | SUPERFAMILY | Protein kinase-like (PK-like) | 312 | 607 | IPR011009 | - | |
Gso11g1306 | 681 | SUPERFAMILY | ABC transporter transmembrane region | 69 | 234 | IPR036640 | GO:0005524|GO:0016021 | |
Gso11g1306 | 681 | Pfam | Protein kinase domain | 346 | 604 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g1306 | 681 | PANTHER | LECTIN RECEPTOR KINASE | 233 | 669 | - | - | |
Gso11g1306 | 681 | PANTHER | - | 233 | 669 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g1306 | Gso-Chr11 | 13905813 | 13911838 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g1306 | 236 | 554 | Receptor kinase-like Gene Family | AT4G04960 | 60.736 | 4.53e-121 | 371 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Gso11g1306 | Pkinase | 1.1e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g1306 | - | - | gsj:114372944 | 1301.19 |