Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1304 ATGAATGAGATGAAGGCCGTGCCCCTACCCTATCAGGAATTTAGAGGGAACGGGGTGCTAGATTTTGCTTCTGGTGCTGCTGCTGCTGTTTCAGATTCGTTGTTACTTCCACAGCAAGAGCAATTTCTGCAAAGGTGGAACCCCCAAAGGGAAAACTTTTGCTATGTGGGCATTGAGCCCTCTTCTGGTTTGGACCGCAAAAGGAAAACAAGCAGCCCTCCCACATCCTCCTCTACACTATCTTCCTCACGCGCCAGCAGCGGCTCCACGGATAGCACGACAGGCACGGCCACGGCGACCGCGGCTGAGAAGGAGAACAACCCACCTCAAGCAGGGTTAGAGGTTGGACAGGCAAGATGTGGGCTGGGAATGGAGGATTGGGAGAGTGTGTTGTCTGAGTCACCAGGTCAAGATCATTCCATTTTGAAGTTGATTATGGGGGACATTGAGGACCCATCTGTGGGTTTGACCAAGCTTTTGCAGGGTGGAAGTGGCTCTCAGGATGTTGAATTCAATGGGGTTGGAGTGGGTTTTGGTTTGGTGGATCAGAGTTCTGTGCTTTTCCCTATTCCTAGTGTGAACTTTGTGAGCAGCAGCAGCAGCATTGACCCTTCTGGTACTGGGAATTGTTCTGATTTCCCTTTCAATTCTCAAACTAATGTTAGCCCCAATGTTCCTAGGGTTGGTTCTGGTGTGAATCCAAACACTACTGGGTTCCCTGCTTCAGCTAGCAATCTCTCACCAGTTTCACTCCCTCAGGGTGTGTTTCTGCCTCAACAACAACAACAGCATCATCCACCAATAGAGCCTCTGGATGAGAAGCTACAAGTTCTCAATCCTCAGTTCATTTTGAACCAAAATCAATCTCAGTTTATGCCAAACGCGGGTTTGGTTTTGCCTTTGACATATGGCCAACTGCAAGAAAATCATCAACTTCTCCCTCAGCCTCCGGCAAAACGCCTGAATTGTGGCCCAAATTATCAGGTTCCAAAGACACCCTTTTTGGACTCTGGCCAAGAGCTGTTACTTCGGAGGCAGCAACAGCAGCTCCAACTGCTTCCTCACCATCTTCTGCAGAGGCCATCCATGGTGGTGGCACCAAAGCAAAAAATGGTGAACTCCGGTGGCCAAGACTTGGCGACCCACCAGCTTCAACAGGCTATAACTGAACAGCTTTTCAAAGCTGCAGAGCTGATCGATGCAGGTAATCTGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAACTTTCTCCCATTGGGAAGCCTTTTCAGAGGGCTGCTTTTTATTTCAAAGAGGCCTTGCAATTACTTCTCCATTCAAATGCCAACAACAGTTCTTTCACCTTTTCACCCACCGGCCTTCTGCTCAAGATTGGTGCTTACAAATCATTCTCAGAAATCTCACCAGTTCTGCAGTTCGCTAATTTTACTTGTAACCAAGCACTGCTTGAAGCTGTGAAAGGGTTTGATCGCATTCACATAATAGATTTTGATATTGGGCTTGGTGGACAGTGGTCTTCTTTCATGCAAGAGTTAGCACTCAGGAATGGCGGTGCACCTGAACTCAAGATCACTGCATTTGTGTCACCCTCCCACCATGATGAAATTGAGCTCAGTTTCACTCAGGAGAGCTTGAAGCAATATGCTGGGGAGTTACGCATGCCCTTTGAGCTGGAGATTCTGAGCCTTGAGTCTTTAAATTCTGCTTCCTGGCCCCAGCCACTTCGTGACTGCAAAGCTGTAGTGGTTAACATGCCTATTGGCTCTTTCTCAAATTACCCATCATATCTACCTTTGGTCCTTCGTTTTGTGAAGCAGCTCATGCCAAAAATTGTGGTTACATTGGATAGAAGTTGTGATCGAACTGATGCACCATTTCCTCAGCATCTGATTTTTGCACTTCAGTCTTATTCAGGGCTGCTTGAGTCACTTGATGCGGTTAATGTTCACCCAGATGTCCTTCAGATGATTGAGAAGTATTATCTTCAGCCATCAATGGAGAAGCTTGTTTTGGGTCGACATGGTTTGCAGGAAAGAGCACTTCCTTGGAAGAACCTTCTCTTGTCATCTGGGTTTTCACCATTGACATTTAGTAACTTTACAGAATCCCAGGCTGAGTGTTTGGTGCAGAGGACTCCTAGCAAGGGGTTCCATGTTGAGAAGAGGCAGTCTTCCCTTGTTCTTTGCTGGCAAAGGAAGGATCTCATCTCAGTTTCAACTTGGAGATGCTAA 2238 0.4745 MNEMKAVPLPYQEFRGNGVLDFASGAAAAVSDSLLLPQQEQFLQRWNPQRENFCYVGIEPSSGLDRKRKTSSPPTSSSTLSSSRASSGSTDSTTGTATATAAEKENNPPQAGLEVGQARCGLGMEDWESVLSESPGQDHSILKLIMGDIEDPSVGLTKLLQGGSGSQDVEFNGVGVGFGLVDQSSVLFPIPSVNFVSSSSSIDPSGTGNCSDFPFNSQTNVSPNVPRVGSGVNPNTTGFPASASNLSPVSLPQGVFLPQQQQQHHPPIEPLDEKLQVLNPQFILNQNQSQFMPNAGLVLPLTYGQLQENHQLLPQPPAKRLNCGPNYQVPKTPFLDSGQELLLRRQQQQLQLLPHHLLQRPSMVVAPKQKMVNSGGQDLATHQLQQAITEQLFKAAELIDAGNLELAHGILARLNHQLSPIGKPFQRAAFYFKEALQLLLHSNANNSSFTFSPTGLLLKIGAYKSFSEISPVLQFANFTCNQALLEAVKGFDRIHIIDFDIGLGGQWSSFMQELALRNGGAPELKITAFVSPSHHDEIELSFTQESLKQYAGELRMPFELEILSLESLNSASWPQPLRDCKAVVVNMPIGSFSNYPSYLPLVLRFVKQLMPKIVVTLDRSCDRTDAPFPQHLIFALQSYSGLLESLDAVNVHPDVLQMIEKYYLQPSMEKLVLGRHGLQERALPWKNLLLSSGFSPLTFSNFTESQAECLVQRTPSKGFHVEKRQSSLVLCWQRKDLISVSTWRC* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1304 745 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 30 744 IPR005202 -
Gso11g1304 745 ProSiteProfiles GRAS family profile. 379 744 IPR005202 -
Gso11g1304 745 PANTHER SCARECROW-LIKE PROTEIN 6 30 744 - -
Gso11g1304 745 MobiDBLite consensus disorder prediction 62 114 - -
Gso11g1304 745 Pfam GRAS domain family 389 744 IPR005202 -
Gso11g1304 745 MobiDBLite consensus disorder prediction 67 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1304 Gso-Chr11 13741014 13744081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1304 387 745 GRAS Transcription Factor Family AT4G00150 59.669 3.32e-140 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso11g1304 GRAS 5.5e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1304 - - gmx:100805945 1355.5