Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1273 ATGGATGATGGAAATGCTGAGCTTTCTGATAAGCTTTCAGATAATAATGTTCTATTTTTGAATCCAGAGTCATGTAGCAGTTTTCAGGCTTCAAGTAGCAGCAGAACATGCACACACACTCACACTTGCAATCCACCTGGCCCTGATGCTGCTCATACACACACATGCTATCACACACACACCCAAGTTTTTGCACCAGAAGATGATGGCAGGAAGCACTCAAACTCCAAGCAAAAAAGGCCTTCTGGAAACCGAGAAGCGGTTAGGAAGTATAGGGAGAAGAAGAAGGCACACACAGCATACTTGGAGGAGGAAGTTAAGAAATTGCATATGGTGAATCAACAACTAGTGAGGAAGCTACAAGGGCAGGCACTTCTTGAAGCAGAATTAGCAAGGTTGAGGAGCATTTTGGCACGACTTAAGGGGAAAATAGACAGTGAATTGGGTGCTTGGCCCTTTCAAAAACAATATTGTAACACTTCTTACATTTTCAAAGAAGGGGATGCTGGTCTTGAGTGTCAGAAGAACAATTTGCCATGCTTCCATCCACATGTAGGATCATCATCCCAGGTCAACATTTGTGCATGTGGAAAATCCATGATTCCATTGGATGGAAACTGCCAACCTGAAATGGTAGATTGCCAAGTAGATGCAAATAACATGACCAGTACTGAAGGACAAACTGTGGATAACGTCATGTCATCTGCATCTCAAGACGGATAG 723 0.4315 MDDGNAELSDKLSDNNVLFLNPESCSSFQASSSSRTCTHTHTCNPPGPDAAHTHTCYHTHTQVFAPEDDGRKHSNSKQKRPSGNREAVRKYREKKKAHTAYLEEEVKKLHMVNQQLVRKLQGQALLEAELARLRSILARLKGKIDSELGAWPFQKQYCNTSYIFKEGDAGLECQKNNLPCFHPHVGSSSQVNICACGKSMIPLDGNCQPEMVDCQVDANNMTSTEGQTVDNVMSSASQDG* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1273 240 Pfam Basic region leucine zipper 74 129 IPR004827 GO:0003700|GO:0006355
Gso11g1273 240 SUPERFAMILY Leucine zipper domain 77 121 IPR046347 GO:0003700|GO:0006355
Gso11g1273 240 MobiDBLite consensus disorder prediction 64 90 - -
Gso11g1273 240 Gene3D - 70 146 - -
Gso11g1273 240 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 74 140 IPR004827 GO:0003700|GO:0006355
Gso11g1273 240 MobiDBLite consensus disorder prediction 63 95 - -
Gso11g1273 240 CDD bZIP 77 131 - -
Gso11g1273 240 PANTHER BASIC LEUCINE ZIPPER 23 1 215 - -
Gso11g1273 240 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 215 - -
Gso11g1273 240 SMART brlzneu 72 139 IPR004827 GO:0003700|GO:0006355
Gso11g1273 240 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1273 Gso-Chr11 11803823 11805752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1273 1 182 bZIP Transcription Factor Family AT2G16770 47.895 1.64e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso11g1273 bZIP_2 3.8e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1273 K25785 - gmx:100527780 461.84