Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1243 ATGGGAAAGTCTTACCCAACTGTGAGTGCTGATTACCAGAAGGCCGTTGAGAAGGCGAAGAAGAAGCTCAGAGGCATCATCGCTGAGAAGAGATGCGCTCCTCTAATGCTCCGTTTGGCATGGCACTCTGCTGGAACCTTTGACAAGGGCACGAAGACCGGTGGACCCTTCGGAACCATCAAGCACCCTGCCGAACTGGCTCACAGCGCTAACAACGGTCTTGACATCGCTGTTAGGCTTTTGGAGCCACTCAAGGCGGAGTTCCCTATTTTGAGCTACGCCGATTTCTACCAGTTGGCTGGCGTTGTTGCCGTTGAGGTCACGGGTGGACCTGAAGTTCCATTCCACCCTGGAAGAGAGGACAAGCCTGAGCCACCACCAGAGGGTCGCTTGCCCGATGCCACTAAGGGTTCTGACCATTTGAGAGATGTGTTTGGCAAAGCTATGGGGCTTACTGACCAAGATATCGTTGCTCTATCTGGGGGTCACACTATTGGAGCTGCACACAAGGAGCGTTCTGGATTTGAGGGTCCCTGGACCTCTAATCCTCTTATTTTCGACAACTCATACTTCACGGAGTTGTTGAGTGGTGAGAAGGAAGGTCTCCTTCAGCTACCTTCTGACAAGGCTCTTTTGTCTGACCCTGTATTCCGCCCTCTCGTTGATAAATATGCAGCGGACGAAGATGCCTTCTTTGCTGATTACGCTGAGGCTCACCAAAAGCTTTCCGAGCTTGGGTTTGCTGATGCCTAA 753 0.5206 MGKSYPTVSADYQKAVEKAKKKLRGIIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKHPAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELGFADA* 251
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1243 250 ProSitePatterns Peroxidases active site signature. 33 44 IPR019794 GO:0004601
Gso11g1243 250 MobiDBLite consensus disorder prediction 113 137 - -
Gso11g1243 250 PRINTS Haem peroxidase superfamily signature 33 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PRINTS Haem peroxidase superfamily signature 91 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PRINTS Haem peroxidase superfamily signature 109 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PANTHER L-ASCORBATE PEROXIDASE 1, CYTOSOLIC 1 249 - -
Gso11g1243 250 CDD ascorbate_peroxidase 5 250 - -
Gso11g1243 250 ProSitePatterns Peroxidases proximal heme-ligand signature. 155 165 IPR019793 -
Gso11g1243 250 ProSiteProfiles Plant heme peroxidase family profile. 74 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 Gene3D Peroxidase, domain 2 132 239 - -
Gso11g1243 250 Pfam Peroxidase 20 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 MobiDBLite consensus disorder prediction 115 137 - -
Gso11g1243 250 Gene3D - 19 246 - -
Gso11g1243 250 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 1 249 IPR044831 GO:0004601|GO:0034599
Gso11g1243 250 PRINTS Plant ascorbate peroxidase signature 12 32 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PRINTS Plant ascorbate peroxidase signature 33 48 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PRINTS Plant ascorbate peroxidase signature 51 61 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PRINTS Plant ascorbate peroxidase signature 65 89 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PRINTS Plant ascorbate peroxidase signature 90 108 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PRINTS Plant ascorbate peroxidase signature 109 121 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PRINTS Plant ascorbate peroxidase signature 130 147 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PRINTS Plant ascorbate peroxidase signature 149 170 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PRINTS Plant ascorbate peroxidase signature 171 195 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 PRINTS Plant ascorbate peroxidase signature 223 247 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso11g1243 250 SUPERFAMILY Heme-dependent peroxidases 5 246 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso11g1243 Gso-Chr11 11420939 11423488 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1243 6 246 Peroxidase AT4G17690 30.928 1.92e-20 86.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1243 K00434 - gmx:553156 500.36
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1243 11 11420939 11423488 Gso11g1243 11 11420939 11423488 ECH
Gso12g0600 12 5431993 5434735 Gso11g1243 11 11420939 11423488 GST