Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1230 ATGAAGGATTGCAGAGAAATTTGCTCATTTATTTGTGCCTTATCAATCTTACCCTTGGTATGTTTTTCTGCCAACTTTGTTCCTATAGATAATTACCTTATAGACTGTGGATCACCAACCAATACTTCAATAGATAGCCGCAATTTCTCAGCGGATAGTTTCTATAAGAATTTCCTTTCCACACAACAAGATATTCTTGCTAGTACCTCCTTGAAATCGATCACTTCCACCCGTGATTCGCCTCTCTATTCAACCGCTAGAATTTTCACCGCACCCTCAAAGTACACTTTTCCTATTAACAAAAAGGGGAGACATTGGATCCGTCTTTACTTCTTTCCATTTGCATATGAGAAGTACGATTTGAGTGCTGCGAAATTCGCTGTTTCCACCCAGAACTATAATCTTCTCAGTGACTTTAGTGTGCTGAAAAATCCTGTTATGAAGGAGTACTCTCTAAGTGTGAACTCAGACACCCTTGTGATCACCTTTGTGCCTTCCGACAATTCCATTGCTTTCGTGAGTGCCATTGAAGTTGTTTCGGTCCCTGATGACCTCATTATTGATGATGCTTTCACCCTAAATCCAGCAGGAAGCTACTCTGGCTTGTTTGCACAGGCACTGGAGACAGTTTTCAGGGTTAACATGGGTGGTCCAACCGTCTCCTCTGGCAGTGACACGCTTCAACGAACTTGGGTTCCTGATAAAAAATTCCTTATACAACCTAATTTGGCCCGTAATTTTACAAATATAGGTGCTGTGAAATATGTAGATGGCGGGCCAACAGCAAATACTGCCCCACCTATTGTTTATGGTACTCTAACACAGATGAATTCAGCCGATGATCCCCGAAGTAATTTCAATGTGACTTGGCAATTTGATGTTGAGCCTCAGTTTCAGTACCTTGTTCGACTTCACTTCTGTGATATAATCAGCAAAAGTCTCAACGAGCTGTACTTCAATGTTTACATTAACTCCTGGTTTGTTGCCAAGGATCTTGATCTTAGTACGAGAAATAATATTTTGGGTGCTCCATTTTTCAAAGATATGATTACAGCCCCATCTGCCAGCACCAAAATTCTCGTAAGCATAGGCCCTTCTACCGTGAGTAACGATTATCCTAATGCTATTTTGAATGGGCTGGAAATAATGAAAATGAACAACTCTGTGAGTAGTCTCAGCTCATCAACGGCTGTGCCTTTGTCTAGTACTTCTGGTTCAGGTTCTAAGAATGTTGGCTTGATAGTGGGCGTGAGTGTTGGGGCATTTCTTGCAGTGTTCATTGTTGGAGTTTTCTTTTTTCTACTATGCAGGAAAAGAAAACGTTCTGGAAAAGAAGGGCATTCGAAGACATGGATTCCCTTATCAATCAATGATGGAACTTCTCACACCATGGGAAGTAAATATTCTAATGCCACAACAGGAAGTGCTGCTTCAAACTTGGGGTATCGCTTCCCTTTTGTGACAGTTCAGGAGGCTACAAATAATTTCGATGAGAGTTGGGTTATTGGCATTGGTGGTTTTGGTAAAGTATACAAGGGAGAGTTAAATGATGGTACTAAAGTTGCAGTTAAGAGGGGTAATCCTCGGTCCCAGCAGGGGCTTGCAGAGTTCCGAACTGAAATTGAGATGCTGTCTCAGTTCCGCCACCGCCATCTAGTATCATTGATTGGATATTGTGATGAAAAGAATGAAATGATATTGATATATGAATATATGGAGAAAGGAACTCTCAAAAGCCATCTTTATGGTTCAGGTTTCCCAAGCTTAAGTTGGAAGGAGAGACTTGAGATATGCATTGGAGCAGCTAGAGGACTGCATTACCTTCACACCGGGTATGCTAAGGCCGTTATTCACCGTGATGTGAAATCTGCAAATATCCTGCTTGATGAGAACCTCATGGCCAAAGTTGCTGATTTTGGGCTATCGAAGACTGGGCCTGAAATTGATCAGACACATGTGAGCACAGCTGTCAAAGGGAGTTTTGGGTACCTTGATCCCGAGTATTTCAGGAGGCAACAGCTTACAGAAAAGTCAGATGTGTATTCATTTGGGGTGGTTCTGTTTGAGGCTCTTTGCGCTAGACCTGTTATTGATCCAACCCTTCCTAGAGAAATGGTGAACTTGGCTGAATGGAGTATGAAATGGCAGAAAAGAGGGCAATTGGAGCAAATAATAGATCCAACTCTTGCTGGGAAAATCAGACCAGATTCTCTTAGGAAGTTCGGAGAAACCGCTGAAAAATGTTTGGCTGACTTTGGCGTTGACAGGCCTTCTATGGGAGATGTCTTGTGGAACTTGGAGTATGCTCTCCAACTTCAAGAGGCTGTTGTTCAAGGTGATCCTGAAGAAAATAGTACAAACATGATTGGTGAACTCTCTCCACAGGTCAACAATTTCGACCGTGAAGTAAGTGTTTCTGCGGCACAATTTGAAGCAACAAGTCTCGATGATCTGTCTGGTGTTTCTATGAGTAGAGTATTCTCACAGCTGGTGAAGTCTGAAGGGAGGTGA 2511 0.4229 MKDCREICSFICALSILPLVCFSANFVPIDNYLIDCGSPTNTSIDSRNFSADSFYKNFLSTQQDILASTSLKSITSTRDSPLYSTARIFTAPSKYTFPINKKGRHWIRLYFFPFAYEKYDLSAAKFAVSTQNYNLLSDFSVLKNPVMKEYSLSVNSDTLVITFVPSDNSIAFVSAIEVVSVPDDLIIDDAFTLNPAGSYSGLFAQALETVFRVNMGGPTVSSGSDTLQRTWVPDKKFLIQPNLARNFTNIGAVKYVDGGPTANTAPPIVYGTLTQMNSADDPRSNFNVTWQFDVEPQFQYLVRLHFCDIISKSLNELYFNVYINSWFVAKDLDLSTRNNILGAPFFKDMITAPSASTKILVSIGPSTVSNDYPNAILNGLEIMKMNNSVSSLSSSTAVPLSSTSGSGSKNVGLIVGVSVGAFLAVFIVGVFFFLLCRKRKRSGKEGHSKTWIPLSINDGTSHTMGSKYSNATTGSAASNLGYRFPFVTVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMEKGTLKSHLYGSGFPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVIDPTLPREMVNLAEWSMKWQKRGQLEQIIDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQVNNFDREVSVSAAQFEATSLDDLSGVSMSRVFSQLVKSEGR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1230 836 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Gso11g1230 836 ProSiteProfiles Protein kinase domain profile. 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1230 836 Gene3D Phosphorylase Kinase; domain 1 458 571 - -
Gso11g1230 836 Gene3D Transferase(Phosphotransferase) domain 1 572 789 - -
Gso11g1230 836 Pfam Protein tyrosine and serine/threonine kinase 501 693 IPR001245 GO:0004672|GO:0006468
Gso11g1230 836 Pfam Malectin-like domain 34 385 IPR024788 -
Gso11g1230 836 SUPERFAMILY Protein kinase-like (PK-like) 476 767 IPR011009 -
Gso11g1230 836 PANTHER OS07G0166700 PROTEIN 19 827 IPR045272 GO:0004714|GO:0006468
Gso11g1230 836 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 19 827 - -
Gso11g1230 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Gso11g1230 836 SMART serkin_6 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1230 836 CDD STKc_IRAK 502 767 - -
Gso11g1230 836 Gene3D - 205 387 - -
Gso11g1230 836 Gene3D - 31 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1230 Gso-Chr11 11182170 11185379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1230 9 836 Receptor kinase-like Gene Family AT3G46290 66.428 0.0 1111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso11g1230 Malectin_like 1.3e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1230 - - gmx:100305414 1590.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0611 12 5661138 5665021 Gso11g1230 11 11182170 11185379 GST
Gso15g0375 15 3385050 3388633 Gso11g1230 11 11182170 11185379 PCT
Gso11g3429 11 50240706 50244519 Gso11g1230 11 11182170 11185379 PCT
Gso11g1230 11 11182170 11185379 Gso15g0375 15 3385050 3388633 PCT
Gso11g1230 11 11182170 11185379 Gso11g3429 11 50240706 50244519 PCT