Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1204 ATGTCTTTGCAAAACAAGGGATTTTGGATGGTAAAGGGTTCTGGACACATTAATGACAGAGATTCAGTATTTGATAATCCCACCAAAATTGAACCAAAACGATCTCATCAATGGTTTGTTGATGCTGCTGAAGTAGATTTTTTTCCAAACAAGAAACAAGCCGTAGAAGATGCAGATGAAAAATCTAGTCCTGGATTTTCAAATGTAAATATTCCTCCCTGGGATAACAATCCCAATTTTCATTCAGTCCCAAACCAATTTATTGGCCGGTTATTTGGGTCTGAAACCAGGCCTGTCAATTTCACTGAAAAGAATACTTATGTTTTGGCTGATGATTCTAATGTGAGATCAAAGATGGTCACCAATCAATATGGAGATGAAGCATCTTTTGGTTTGTCTATATCTCATTCTATTGAAGATTCTGAAGCATGTGTAAATTTTGGTGGAATAAAAAAAGTCAAAGTAAATCAGGTTAAGGAAGTTGATGTACAGGCTCTGGAGGGACATAATTTTGGTAGGCAGAGTAATGGTGATCTACATCAGGCCTATAACAGGGAAGTTGAGACAAGGTCTGCATCAATAGGGCAAGCCTTTGACAAGGATCGTGATGCCACTTTAATGGGACTCACCTACAGCAGAGGGGATGCACATGTCAGATCATTTGGTGCCTCCTTTGTCAAAGGTGATGACTCAATCGTATCGATTAGTGAATCCTATAATAAAGAGGACACAAATATAATTTCTTTTGGTGGGTTCCCAGATGAAAGGGATATTATCTCTGTGGGTAGGCCTGCTGCAGAGTATGATCAATTATATAATCAATCTTCAGTTCATGTGTCAACAACAGCCCACGAGAAAGAGTTGGATGTGTCAAGTTCTGATGCAGTTGCAAGTACACTTCAGGTAGCAAAAGTTAAGTCTGAAACTGTATCCAAGAATAAACAAGAGCTCAAAACAGCAAAGAAAGAAGCTCCAAACAGCTTCCCTTCTAATGTCAGAAGCTTGATATCTACTGGTATTCTTGATGGAGTTCCTGTGAAGTATATCTCAGTGTCACGTGAGGAACTTCGAGGAATTATAAAAGGCTCTGGTTATCTTTGTGGGTGTCAGTCATGTAACTATACAAAGGTTCTGAATGCTTACGAGTTTGAGAGACATGCTGGCTGCAAAACAAAACATCCAAACAATCACATTTATTTTGAGAATGGGAAGACTATTTATCAAATAGTACAGGAATTGAGGAGTACCCCCGAAAGTTTGTTGTTTGATACAATTCAAACAGTTTTTGGTGCACCAATTAATCAGAAAGCATTTCGCAACTGGAAAGAATCATTTCAAGCAGCAACACGGGAGCTTCAACGCATTTATGGAAAGGAAGAACTTAACCTATAA 1392 0.3858 MSLQNKGFWMVKGSGHINDRDSVFDNPTKIEPKRSHQWFVDAAEVDFFPNKKQAVEDADEKSSPGFSNVNIPPWDNNPNFHSVPNQFIGRLFGSETRPVNFTEKNTYVLADDSNVRSKMVTNQYGDEASFGLSISHSIEDSEACVNFGGIKKVKVNQVKEVDVQALEGHNFGRQSNGDLHQAYNREVETRSASIGQAFDKDRDATLMGLTYSRGDAHVRSFGASFVKGDDSIVSISESYNKEDTNIISFGGFPDERDIISVGRPAAEYDQLYNQSSVHVSTTAHEKELDVSSSDAVASTLQVAKVKSETVSKNKQELKTAKKEAPNSFPSNVRSLISTGILDGVPVKYISVSREELRGIIKGSGYLCGCQSCNYTKVLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTVFGAPINQKAFRNWKESFQAATRELQRIYGKEELNL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1204 463 PANTHER DNA-BINDING PROTEIN 1 463 - -
Gso11g1204 463 Pfam Tify domain binding domain 358 413 IPR032308 -
Gso11g1204 463 PANTHER AUTOIMMUNE REGULATOR 1 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1204 Gso-Chr11 10879505 10883042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1204 310 446 PHD Transcription Factor Family AT3G53680 52.899 1.22e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1204 - - gmx:100802229 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1204 11 10879505 10883042 Gso11g1204 11 10879505 10883042 ECH