Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1192 ATGGCGAAAACGCTCATTTCGTCTCAATCGTTCATCGGCACGCCGCTCCCCTCACTCCCTCGCCACCACCTCCCCCACCGCACCAGGCTCGTCGCCACCAAAGTCCTCGTCAGCCTCCACGAAATTCCCCCAATCCACTCCATAAGCCACAACATTGACTTCGCCGGAATCGTGACTAGAGCCGAAGGCCTTCTCTACACGCTCGCCGATGCTGCGGTTGCGGCGGACCCTGCGGTTGCTGCGGACTCTGCGGCTTCCACCACCGATGCTGCCGTACAGAAGAGCGGAGGCTGGTTCGGCTTCATCTCCGAAGCCATGGAGTTCGTTCTCAAGGTGTTGAAGGATGGCCTTTCTGCCGTGCATGTCCCTTATGCATATGGATTTGCTATCATATTGCTCACTGTTATAGTTAAGGCCGCAACGCTTCCCTTGACAAAGCAACAGGTTGAATCTACACTAGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATTCAAGATAGATATGCTGGCAATCAGGAAAGAATACAACTTGAGACGTCAAGGCTATATCGGCAGGCTGGAGTTAACCCATTGGCAGGTTGTTTACCAACTCTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAGCTTTATCAAATGTGGCAAATGAGGGACTGCTAACCGAAGGTTTCCTTTGGATCCCCTCTTTGGGTGGTCCTACTACCATTGCTGCTAGACAAAGTGGAGCGGGAATTTCTTGGCTTTTTCCATTTGTGGACGGGCATCCACCTTTGGGTTGGCAAGATACTGCAGCATATCTTGTTTTACCTATTCTTCTTGTCGTTTCTCAATACGTTTCAATGGAAATCATGAAACCACCTCAGACAGATCCTTCTCAAAAGAATCAACTTCTTATTTTAAAGTTTCTTCCACTCATGATTGGCTACTTCTCACTATCTGTCCCATCAGGACTAACAATTTACTGGTTTATAAACAATGTCCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTGGGAGGTGCAAAGCCTGTTGTGAATGAAAATGCTGGTGGGATTATTACTGCTGGACGCGCTAAAAGATCAGATTTGCAGCCAGTAAGGAATGGTGAAAGGTTTAAGCAGTTAAAAGAAGAGGACAAGAAGAAAAAGGTAAGCAAGGCACTGCCAGTGGAAGAAGTTCAGCCCCTGGCTTCTGTGTCTGCTTCTGATGATGGCTCGGATACAGAAAGTGACAATAAGGGACAGGAAGATGCAGAAGAAGCATATGCTTCTAAAGTTGGCGAAGAGGTTCAAAATTATTCTAGGGAAAGAAGAAGCAAGCGTTCGAAGCGGAAGCGTGCTGTATAA 1353 0.4752 MAKTLISSQSFIGTPLPSLPRHHLPHRTRLVATKVLVSLHEIPPIHSISHNIDFAGIVTRAEGLLYTLADAAVAADPAVAADSAASTTDAAVQKSGGWFGFISEAMEFVLKVLKDGLSAVHVPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQDRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQYVSMEIMKPPQTDPSQKNQLLILKFLPLMIGYFSLSVPSGLTIYWFINNVLSTAQQVWLRKLGGAKPVVNENAGGIITAGRAKRSDLQPVRNGERFKQLKEEDKKKKVSKALPVEEVQPLASVSASDDGSDTESDNKGQEDAEEAYASKVGEEVQNYSRERRSKRSKRKRAV* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1192 450 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 126 338 IPR028055 -
Gso11g1192 450 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 444 - -
Gso11g1192 450 MobiDBLite consensus disorder prediction 408 438 - -
Gso11g1192 450 MobiDBLite consensus disorder prediction 377 450 - -
Gso11g1192 450 Pfam 60Kd inner membrane protein 126 339 IPR001708 GO:0016021|GO:0032977
Gso11g1192 450 PANTHER OXA1 1 444 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1192 Gso-Chr11 10754144 10759441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1192 22 395 Chloroplast and Mitochondria Gene Families AT2G28800 68.421 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1192 K03217 - gmx:100813782 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1192 11 10754144 10759441 Gso11g1192 11 10754144 10759441 ECH
Gso12g0530 12 4746385 4756199 Gso11g1192 11 10754144 10759441 GST