Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1183 ATGGGAAACGGCATAGGGAAGCTAACGGTGTGCTTCACCGGAAACGGAGGAGGGGGTCGTCGAAAGCAGGATATATCTATTTTAATAACGGAGCCGTTAGACGAGGGTTTGGGTCACTCTTTCTGCTATGTTAGACCCGACCCGACCCGGATTTCTTCGTCGAAGGTCCACTCGGAGGAAACGACGACGTTCAGAACAATCTCGGGCGCGTCGGTGAGCGCAAACACGTCGACGCCGTTATCGACGGCGTTTGTGGATTTGTACTCGTACGGTTGCATCGACAGAGCCGCGGCGTTTGAGAGTTCAACGTCGTTCGCGGCGTTACCACTTCAGCCGATTCCGAGGACCCTCGTGAACTCGGGCCCGTTCTCGGGGAACCTGAACGGCGGTGGGTTTCCCGGCTCGGGCCCACTGGAGAGAGGGTTCATGTCGGGCCCAATCGAGCGCGGGTTCATGTCCGGGCCCATCGATCGCGGGCTTTTTTCGGGCCCGATTGAGAGGGAAGGGAACGGAATCGGAAACGGATCGGATCATTTTCAGAGAAGCTTCTCGCACGGAGGGTTGGGTTTGGGGTTGGGTATGAGAGTGGGAACGAGGAAGGGTAAGTGGATTCGCGTTTTGCAGAGGGCTATTTCCAAGACTCTGTCTCGGGGGCACAATTCAATTGTGGCTCCGATCAAGGGCGTGGTGGTGAAGGAGCCGGAGTGGATGGTGGCAGCGGCGGCGGCAGCGGCGGAGAAGCATAACGAGAATCTGAGCGTGAATTTGAGTAGCGAGGGGAGTTTGGAGGACTATGATTCGATGGAGAGTCAGAATCTTCAATGGGCGCAGGGGAAAGCAGGGGAGGATCGTGTTCATGTTGTGGTGTCTGAGGAACACGGTTGGGTTTTCGTGGGGATCTATGATGGTTTCAGTGGACCTGATGCACCTGATTACCTTCTCTCCAATCTCTACACCGCGGTGCATAAGGAGCTTAAAGGGTTGTTGTGGGATGACGGGTCTGCACCGGAAAATTCAACGATAAAAGAGGACATGTTGCGAGATGTTACTGCAGATGTTACGGTTACTGATGAAGATGATGCTTGTTCTCACTGTGTTGAGCAAGATAATAATGATAATAATAGAAAGAGCAGTAATAAGAGAGGTAGGAATTCGAGGAATAAGTTCAAGGGTGCTGCGAAGAAATGGGAGGAGAATCAACGGAGGTGGAAGTGTGAGTGGGATAGGGAAAGATTGGAGCTTGATCGGAGATTGAAGGAGCAACTGAATTTAAGTCGATCTGGGTCGGGTGGAGCAGCGAGTTCAATTAATCATTCAGATGTTTTGGAGGCTCTTTCTCGGGCTTTAAAGAAGACTGAGGAGTCTTATCTCGATGTGGCGGATAAGATGGTGATGGAGAATCCTGAATTGGCTTTGATGGGTTCGTGTGTTCTTGTGATGTTGATGAAGGGGGAGGATGTTTATGTGATGAATGTAGGGGATAGTCGAGCTGTGCTGGCTCAGAAGGCTGAGCCTGATTACTGGCTTGGCAAGATCAGGCAGGACTTGGAGAGGATCAATGAGGAGACGATGAATGATCTTGAGTCTTGGGATGTTGATACGTCCAACTTGGTACCGAGTTTGAGCGCGATTCAGCTTACCAAGGATCATAGTACTAGTGTTGAGGAAGAAATCCAGAGAATTAAAAAAGAGCACCCGGATGATCCTTTTGCTGTTGTAAATGACCGTGTGAAGGGTTCTCTCAAAGTTACTCGAGCATTTGGTGCCGGATTTCTCAAACAGCCAAAGTGGAACAACGCACTTCTGGAGATGTTTAGAATAGACTACGTAGGAAACTCTCCTTACATAAGCTGCCTACCATATCTAAAACACCACAGATTAGGCCCAAAGGACAAATTTTTGATTCTATGCTCTGATGGGCTCTATCAGTACTTGTCAAACGAAGAGGCAGTGGCTGAAGTCGAGCTTTTCATCACATTGCAACCCGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTGTTGTTTCGTGCTGCAAAGAAAGCTGGTTTGGACTTTCACGAGTTGCTCGAAATTCCACAGGGTGATAGGCGCCGTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAGGGAAGGATATGGAGATTCTGTGTATAA 2163 0.4984 MGNGIGKLTVCFTGNGGGGRRKQDISILITEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFAALPLQPIPRTLVNSGPFSGNLNGGGFPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPIEREGNGIGNGSDHFQRSFSHGGLGLGLGMRVGTRKGKWIRVLQRAISKTLSRGHNSIVAPIKGVVVKEPEWMVAAAAAAAEKHNENLSVNLSSEGSLEDYDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFSGPDAPDYLLSNLYTAVHKELKGLLWDDGSAPENSTIKEDMLRDVTADVTVTDEDDACSHCVEQDNNDNNRKSSNKRGRNSRNKFKGAAKKWEENQRRWKCEWDRERLELDRRLKEQLNLSRSGSGGAASSINHSDVLEALSRALKKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDTSNLVPSLSAIQLTKDHSTSVEEEIQRIKKEHPDDPFAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRFCV* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1183 720 ProSiteProfiles PPM-type phosphatase domain profile. 264 711 IPR001932 -
Gso11g1183 720 SMART PP2C_4 266 709 IPR001932 -
Gso11g1183 720 PANTHER PROTEIN PHOSPHATASE 2C 21 720 IPR015655 GO:0004722|GO:0006470
Gso11g1183 720 Gene3D - 237 715 IPR036457 -
Gso11g1183 720 Pfam Protein phosphatase 2C 445 667 IPR001932 -
Gso11g1183 720 CDD PP2Cc 434 711 IPR001932 -
Gso11g1183 720 PANTHER PROTEIN PHOSPHATASE 2C 23-RELATED 21 720 - -
Gso11g1183 720 MobiDBLite consensus disorder prediction 364 393 - -
Gso11g1183 720 SUPERFAMILY PP2C-like 279 712 IPR036457 -
Gso11g1183 720 MobiDBLite consensus disorder prediction 364 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1183 Gso-Chr11 10641590 10644907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1183 1 720 PP2C-type Phosphatase Gene Family AT1G07630 66.895 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1183 - - gmx:100810214 1343.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1183 11 10641590 10644907 Gso11g1183 11 10641590 10644907 ECH
Gso12g0522 12 4670087 4673540 Gso11g1183 11 10641590 10644907 GST