Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1174 ATGGACTCCAACTTCCCCGGTGCTTCGGAAGACCAGGGCACACCGTATCTCTCAGACTCGCTTGGTTTTGCAACCATGGAAGACAACGACTTCTCAGAAACTGCAAAGTTCATTAGCCAGATCCTCATGGAAGAAAACGTTGACCAGAAGCCATTCTATGACTCACTCACCTTGCAAGTTACCGAGAAATCCTTCTACGATGCTCTCGCCGGCAACCTACCTCTTTCTCCCGATCAACACCCCGTTCTTCTCAGTCCCGAAGCTGAAACCACCACCACCACCACCACCAGCAGCAGCAGCAGCAGTAGCAACAACAATTTTTCAGATGAATATTCTCGTGAGTTGAAGCTCCGTTCTCCGGATTCTATTTCTGTTTCTGCTTTTCAGTTTAAATCTCAACCACCGCCTTCAGTTACTGTTAGTGACGCAGTCTCAGATTTGGATTCTTCTATTGCCAAACTCTTAGCCCACAATATTTTCAATCATGTTGATTCTGTTTCCCAGTTTAGAAGAGGCTTCGAGGAAGCTAGTAAATTTCTTCCTCCGGGGCCTAACCTTGTAACTGCTCTACATTCAAAGAGAGAAGAACCAATCAATTCTTTTGGAGACAATTCCTATGGGTTGTTGAAGGGTAGAAAGAATCACCAGCGCCAAGAGATAGAAACTAGAGAAGAAGGAGAAGGAGAGAGAAGTAACAAGCAATCAGCACTTTCCCTTGTTGATGAGAGTGACCTGTCAGATGCTTTTGATCGGCTGTTGCTTCATGAAGGAAACCTGTGTGACGAACACATTCGTTTGACGAGTGGATCAGTGAACGTTGAGGAACGAGATGGAGGTAAGGGTCGTTCAAAGAAACAAGGGAGGAGGAAGAAGGAAACGGTGGATTTGAGGAATCTTCTATTGATGTGTTCACAATCTGTGTATGCCAATGACAACAGGACTGCCAATGAATTGCTAAAACAGATTAGGCAACACTCTTCTCCCGTTGGGGATGCATCACAGAGGTTGGCTCATTACTTCACCAATGGCCTCGAAGCACGCTTGGTTGGGGATGGCACAAGTGCACAAGGAATGTATACTTTTCTGAGCTCTAAGAACATCACTGTTGCTGAGTTTCTCAAGGCATACCAGGTTTTCACTTCCTCCAGCCCTTTCAAGAAGTTTATACATTTCTTTGCAAATAAAATGATTATGAAAGCAGCTGCAAAGGCAGAAACCGTTCATATTATTGATTTTGGGATCCTATACGGTTTCCAGTGGCCAATACTCATTAAGTTTTTCTCAAATAGGGAGGGTGGACCTCCCAAGCTTAGGATCACAGGGATAGAGTTTCCCCAACCTGGCTTTCGCCCCGCAGAAAGAATTGAGGAAACAGGTCACCGTCTGGCTAACTATTGTAAGCGTTACAATGTTCCCTTTGAGTACAATGCCATAGCATCGAAGAACTGGGAAAACATTCAGGTTGAAGCCCTCAAAATTCAGAGCAACGAGCTAGTTGCTGTCAATTGTCACTTGAGGTTTGAGAATTTACTGGATGAGTCTATTGAAGTGAACAGTCCTAGAAATGGAGTCCTTCATTTGATCAGGAAGATAAATCCGGATATTTTTACTCAGTCCATCACTAATGGATCATATAATGCCCCTTTCTTTGCCACGCGGTTTAGGGAGGCTCTCTTTCATTATTCTGCTATTTATGATTTGATTGACACAGTCATACCTCGTGAAAACGAATGGAGGTTGATGCTTGAGAGAGAGCTTTTGGGCAGAGAGATTATGAATGTTATAGCATGTGAAGGTTCTGAGAGGATTGAGAGGCCTGAGACATACAAACAGTGGTATGTTAGGAATACGAGGGCTGGTTTCAAGCAGCTCCCGCTAAATGAGGAATTAATGGCCAAATTCAGGACTAAGTTAAAGGAATGGTACCACAGAGATTTTGTCTTCGATGAAGATAACAAGTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTGTATGCTTCCACTTGTTGGGTGCCAGCATAA 2022 0.4411 MDSNFPGASEDQGTPYLSDSLGFATMEDNDFSETAKFISQILMEENVDQKPFYDSLTLQVTEKSFYDALAGNLPLSPDQHPVLLSPEAETTTTTTTSSSSSSSNNNFSDEYSRELKLRSPDSISVSAFQFKSQPPPSVTVSDAVSDLDSSIAKLLAHNIFNHVDSVSQFRRGFEEASKFLPPGPNLVTALHSKREEPINSFGDNSYGLLKGRKNHQRQEIETREEGEGERSNKQSALSLVDESDLSDAFDRLLLHEGNLCDEHIRLTSGSVNVEERDGGKGRSKKQGRRKKETVDLRNLLLMCSQSVYANDNRTANELLKQIRQHSSPVGDASQRLAHYFTNGLEARLVGDGTSAQGMYTFLSSKNITVAEFLKAYQVFTSSSPFKKFIHFFANKMIMKAAAKAETVHIIDFGILYGFQWPILIKFFSNREGGPPKLRITGIEFPQPGFRPAERIEETGHRLANYCKRYNVPFEYNAIASKNWENIQVEALKIQSNELVAVNCHLRFENLLDESIEVNSPRNGVLHLIRKINPDIFTQSITNGSYNAPFFATRFREALFHYSAIYDLIDTVIPRENEWRLMLERELLGREIMNVIACEGSERIERPETYKQWYVRNTRAGFKQLPLNEELMAKFRTKLKEWYHRDFVFDEDNKWMLQGWKGRILYASTCWVPA* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1174 673 MobiDBLite consensus disorder prediction 1 19 - -
Gso11g1174 673 ProSiteProfiles GRAS family profile. 287 671 IPR005202 -
Gso11g1174 673 MobiDBLite consensus disorder prediction 201 239 - -
Gso11g1174 673 MobiDBLite consensus disorder prediction 88 110 - -
Gso11g1174 673 MobiDBLite consensus disorder prediction 1 21 - -
Gso11g1174 673 MobiDBLite consensus disorder prediction 275 291 - -
Gso11g1174 673 MobiDBLite consensus disorder prediction 210 231 - -
Gso11g1174 673 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 24 672 IPR005202 -
Gso11g1174 673 MobiDBLite consensus disorder prediction 271 291 - -
Gso11g1174 673 Pfam GRAS domain family 296 670 IPR005202 -
Gso11g1174 673 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 24 672 - -
Gso11g1174 673 MobiDBLite consensus disorder prediction 88 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1174 Gso-Chr11 10546910 10549651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1174 36 673 GRAS Transcription Factor Family AT1G07530 47.489 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso11g1174 GRAS 9.1e-117 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1174 - - gmx:100795855 1280.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0512 12 4576284 4579092 Gso11g1174 11 10546910 10549651 GST
Gso11g1174 11 10546910 10549651 Gso15g0328 15 2958002 2960413 PCT
Gso11g1174 11 10546910 10549651 Gso11g3481 11 50693637 50696229 PCT