Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1173 ATGGCTTTCGATGCAGCATCAAAGAACTGGGAAACCATTCAGGTTGAAGCCCTCAAAATAGAGAGCAATGAGCTAGTTGCTGTCAACTGTCACCAGAGGAAGATAAATCCGGATATCTTTACTCAGTCCATCACTAGTGGATCATATAATGCCCCTTTCTTGTCCACGCGGTTTAGGGAGGCTCTCTTTCATTATTCTGGCATTTCTGATAAGATTGACACTGTCATACCTCGTAAAAACGATAGGAGGTTGATGGTTGAGAGAGAGCTTTTGGGCAGGGAGATTATGAATTTTATAGCATGTGAAGGTTCTGAGAGGATTGAGAGGCCTGAGACATACAAACAGTGGCAGGTTAGGAATATGAAGGCTGGTTTCAAGCAGTTACCACTGGATGAAGAATTAATGGCCAAATTCAGGAGTAAGTTAAAGGAATACCACAGAGATTTTGTCTTAGATGAAAATAACAACTGGATGCTTCAAGCATGCTGCAATGGTGAAGCTTATTTTGCTGGTTACAATGTTTCAAGTTCTGATATCCTTGGTCTCTGGCTACCTACTTTCTTAACCTTCAGAAAAACTTTATTGAAATTACTGTTAAATGTCTGCTGCATAACCATATCAAATCATATCTCATTCTTTCTGAACAGAGTCAAAACCTATTTCAGTGTTGTTGGTTTTGGTGAAGACGATGGCATAGCGTATCTCTCAGACTCGCTTGGTTTTGCAACCATGGAAGACAACGACTTCTCAGAAACTGCAAAGTTCATTAGCCAGATCCTCATGGAAGAAAACGTTGAACTTGAACAGAGCCCATTCTACGACTCACTCACTCTGCAAGTTACTGAGAAATCCTTCTACGACGCTCTCGCCGGTAACCTACTTCTCAGTCCCCAAGCTAGCAACACCAATTTTTCAGTTGAAAATTCTCGTGAGTTGAACCTCCCTTCCCCAGATTCTCTTTCTGTTTCTGCTCTTCAGTTTAACCCCCACGCACTCTCTCAACCACCACCTTTGGTTAATGTTAGTGAAGGAGTCTCTGATTTGGACTCTTCTATTGCAAGACTCTTAGCACATAATATTTTCAATGATGTTGATTCTGTTTCCCACTTTAGGAGAGGCTTCGAGGAAGCTAGTAGATTTCTTCCTCCAGGGCCTAACCTTGTAACTGCTCTACATTCAAACGCGCAAGAACCAATCAATTCTTTTCGAGAGAATTCCTATGGGTTGTTGAAGGGTAGAAAGAATCTTGAGCGCCAAGAGATAAACACTAGAGAAGAAGAAAGAGGAGGGAGAAGTAACAAGCAATCAGCATTTTCCTTTGTTGATGAGAGTGACCTGTCAGATGCTATTGATAGGGTGTTTCTTAGTGTGGAAAACGTGTGTAGTGAACACAGTTCTTTGCAGAGTGGACCACTGAGAGCGGAGGAGCAAGATCGAGGGAAGGGTCTTTCAAAGAAACAAGAGAGGAGGAAGCAGGAAACAGTGGATTTGAGGAATCTTCTGTTGATGTGTTCACAATCTGTGTATGCCAATGACAACAGGACTGCCAATGAATTGCTAAAACAGATTAGGCAACACTCTTCTCCCGTTGGGGATGCATCACAGAGGTTGGCTCATTACTTCGCCAATGGCCTCGAGGCACGCTTGGTTGGGGATGGTACAAGTTCGCAAGGAATGTATACTTTTCTGAGCTCTAAGAACATCACTGCTGCAGAGTTTCTGAAGACACACCAAGATTTTATGTCCGCCAGCCCTTTCAAGAAGTTTACATATTTCTTTGCTAATAAAATGATTATGAAAGCAGCTGCCAAGGTAGAAACCGTCCATATTATTGATTTTGGTATCCTATATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTGTCAAATAGGGAGGGTGGACCTCCCAAGCTTAGAATAACGGGGATAGAGTTTCCCCAACCCGGCTTTCGTCCCACAGAAAAAATTGATGAGACTGGTCGCCGTCTGGCTAACTATTGTAAGCGTTATAGTGTTCCCTTTGAGTACAATGCCATAGCATCAAAGAACTGGGAAACCATTCGGATTGAAGCCCTAAAAATTGAGAGCAACGAGCTAGTTGCTGTCAACTGTCACCAGAGGTTTGAGAATTTACTGGATGACTCTATTGAAGTGAACAGTCCTAGAAATGCAGTCCTGCATTTGATCAGGAAGATAAATCCAAATATTTTTACTCAGTCCATCACTAATGGATCATATAATGCCCCGTTCTTTGCCCCGCGGTTTAGGGAGGCTCTCTTTCATTATTCTGCTATTTATGATCTGATTGACACTATCATACATCGTGAAAATGAAAGGAGATTGATGATTGAGAGAGAGCTTTTGGGCAGGGAGATTATGAATGTTATAGCATGTGAAGGTTCTGAGAGGATTGAGAGGCCTGAGACCTACAAACAGTGGCAGGTTAGGAATATGAAGGCTGGTTTCAAGCAGCTACCACTGGATGAGGAATTAATGGCCAAATTTAGGACTGAGTTAAGAAAGTGGTACCACAGAGATTTTGTCTCAGATGAAGATAGCAACTGGATGCTTCTAGGTTGGAAGGGCCGCATTTTGTTTGCTTCCACTTGTTGGGTGCCAGCATGA 2625 0.4248 MAFDAASKNWETIQVEALKIESNELVAVNCHQRKINPDIFTQSITSGSYNAPFLSTRFREALFHYSGISDKIDTVIPRKNDRRLMVERELLGREIMNFIACEGSERIERPETYKQWQVRNMKAGFKQLPLDEELMAKFRSKLKEYHRDFVLDENNNWMLQACCNGEAYFAGYNVSSSDILGLWLPTFLTFRKTLLKLLLNVCCITISNHISFFLNRVKTYFSVVGFGEDDGIAYLSDSLGFATMEDNDFSETAKFISQILMEENVELEQSPFYDSLTLQVTEKSFYDALAGNLLLSPQASNTNFSVENSRELNLPSPDSLSVSALQFNPHALSQPPPLVNVSEGVSDLDSSIARLLAHNIFNDVDSVSHFRRGFEEASRFLPPGPNLVTALHSNAQEPINSFRENSYGLLKGRKNLERQEINTREEERGGRSNKQSAFSFVDESDLSDAIDRVFLSVENVCSEHSSLQSGPLRAEEQDRGKGLSKKQERRKQETVDLRNLLLMCSQSVYANDNRTANELLKQIRQHSSPVGDASQRLAHYFANGLEARLVGDGTSSQGMYTFLSSKNITAAEFLKTHQDFMSASPFKKFTYFFANKMIMKAAAKVETVHIIDFGILYGFQWPILIKFLSNREGGPPKLRITGIEFPQPGFRPTEKIDETGRRLANYCKRYSVPFEYNAIASKNWETIRIEALKIESNELVAVNCHQRFENLLDDSIEVNSPRNAVLHLIRKINPNIFTQSITNGSYNAPFFAPRFREALFHYSAIYDLIDTIIHRENERRLMIERELLGREIMNVIACEGSERIERPETYKQWQVRNMKAGFKQLPLDEELMAKFRTELRKWYHRDFVSDEDSNWMLLGWKGRILFASTCWVPA* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1173 874 ProSiteProfiles GRAS family profile. 488 872 IPR005202 -
Gso11g1173 874 MobiDBLite consensus disorder prediction 474 491 - -
Gso11g1173 874 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 160 IPR005202 -
Gso11g1173 874 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 239 873 IPR005202 -
Gso11g1173 874 Pfam GRAS domain family 33 160 IPR005202 -
Gso11g1173 874 Pfam GRAS domain family 497 871 IPR005202 -
Gso11g1173 874 MobiDBLite consensus disorder prediction 466 491 - -
Gso11g1173 874 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 6 160 - -
Gso11g1173 874 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 239 873 - -
Gso11g1173 874 ProSiteProfiles GRAS family profile. 1 184 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1173 Gso-Chr11 10537931 10546496 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1173 254 874 GRAS Transcription Factor Family AT1G07530 45.677 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso11g1173 GRAS 2.3e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1173 - - gsj:114377142 1727.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1173 11 10537931 10546496 Gso11g1173 11 10537931 10546496 ECH
Gso12g0511 12 4569708 4572510 Gso11g1173 11 10537931 10546496 GST